RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 ZNF716A6NP11 495 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 A8MXQ7 604 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 IDSB3KWA1 339 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 HIP1O00291 1037 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 PRKAB2O43741 272 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 CLDN9O95484 217 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 CGAP01215 116 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 THY1P04216 161 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 LGALS2P05162 132 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 ZNF735P0CB33 412 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 GATA1P15976 413 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 GCFC2P16383 781 aaKnown RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 GATA2P23769 480 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 UGT1A3P35503 534 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 UGT1A5P35504 534 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 QARSP47897 775 aaKnown RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 SUCLG1P53597 346 aaKnown RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 PKNOX1P55347 436 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLC8A3P57103 927 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 RPS8P62241 208 aaKnown RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 CDK16Q00536 496 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 OGDHQ02218 1023 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 PLD1Q13393 1074 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 HSP90AB3PQ58FF7 597 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 C1orf220Q5T0J3 134 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 ATAD3CQ5T2N8 411 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 RNLSQ5VYX0 342 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 GSG1LQ6UXU4 331 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 SVOPLQ8N434 492 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 KLHL30-AS1Q8NEE0 82 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 OR52H1Q8NGJ2 320 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 FAM110BQ8TC76 370 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 MAGEE2Q8TD90 523 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 HTR3CQ8WXA8 447 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 C1orf147Q96MC9 270 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 GPR61Q9BZJ8 451 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLITRK2Q9H156 845 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 RBKSQ9H477 322 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 NHEJ1Q9H9Q4 299 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 ABCD2Q9UBJ2 740 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 UBQLN1Q9UMX0 589 aaKnown RBP3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 FLVCR1Q9Y5Y0 555 aa3.63□□□□□ -1.83
HMGB3P31-201ENST00000413333 TCRBV9S1A1TA0A576 114 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 HAS3O00219 553 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLITRK3O94933 977 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 LYPD3O95274 346 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 OXSR1O95747 527 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 IGHG4P01861 327 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 STSP08842 583 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 RBMY1CP0DJD4 496 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 ETS2P15036 469 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 COX5AP20674 150 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 HTR1FP30939 366 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 KIR2DS2P43631 304 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 OR3A4PP47883 348 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 BIDP55957 195 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 RPS14P62263 151 aaKnown RBP3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 CCNA1P78396 465 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 CHRNB3Q05901 458 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 VGLL4Q14135 290 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 C15orf32Q32M92 178 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 C6orf226Q5I0X4 101 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 PAGE2BQ5JRK9 111 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 ZNF658Q5TYW1 1059 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 CGB2Q6NT52 195 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 DNM1P46Q6ZS02 220 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 FRA10AC1Q70Z53 315 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 TRIM69Q86WT6 500 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 ECHDC2Q86YB7 292 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 FAM83FQ8NEG4 500 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 SDR9C7Q8NEX9 313 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLC2A14Q8TDB8 520 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 FGF11Q92914 225 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 RASD2Q96D21 266 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLC25A38Q96DW6 304 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 VSIG2Q96IQ7 327 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 SERAC1Q96JX3 654 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 CNOT6LQ96LI5 555 aaKnown RBP3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 SIGLEC12Q96PQ1 595 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 GAL3ST1Q99999 423 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 REEP4Q9H6H4 257 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 HOXC10Q9NYD6 342 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 SLC7A8Q9UHI5 535 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 CSAG2Q9Y5P2 127 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 PLEKHH1Q9ULM0 1364 aa3.62□□□□□ -1.83
HMGB3P31-201ENST00000413333 IGLV8-61A0A075B6I0 122 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 E9PBE3 544 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 WWP2O00308 870 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 LALBAP00709 142 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 ZNF853P0CG23 659 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 ATP1B2P14415 290 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 IGLL1P15814 213 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 FASP25445 335 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 CD1CP29017 333 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 CASP14P31944 242 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 GYG1P46976 350 aa3.61□□□□□ -1.83
HMGB3P31-201ENST00000413333 CCDC173Q0VFZ6 552 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms