RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ZNF672Q499Z4 452 aaPredicted RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 DNAJC14Q6Y2X3 702 aaPredicted RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 RNF130Q86XS8 419 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 SMAP2Q8WU79 429 aaPredicted RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 ZNF75CPQ92670 426 aaPredicted RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 GTPBP3Q969Y2 492 aaKnown RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 APH1AQ96BI3 265 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 OR52E6Q96RD3 313 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 FAIMQ9NVQ4 179 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 NOSIPQ9Y314 301 aaKnown RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 ROS1P08922 2347 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 FREM1Q5H8C1 2179 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 A0A1W2PP18 115 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 C9JVG2 144 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 SLCO1B7G3V0H7 640 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 SDHDO14521 159 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 HDAC3O15379 428 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 IGHV1-2P23083 117 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 MAGEA8P43361 318 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 MAP2K6P52564 334 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 NME5P56597 212 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 UFM1P61960 85 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 FBXW9Q5XUX1 488 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 LRRC74BQ6ZQY2 392 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 UBE2J2Q8N2K1 259 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 ANKRD42Q8N9B4 389 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 LILRB1Q8NHL6 650 aaPredicted RBP13.04□□□□□ -0.32
CBX3-203ENST00000409747 WDR60Q8WVS4 1066 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
CBX3-203ENST00000409747 DDIT4LQ96D03 193 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 THAP1Q9NVV9 213 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 TRAPPC4Q9Y296 219 aa13.04□□□□□ -0.32
CBX3-203ENST00000409747 AGAP5A6NIR3 686 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 ZNF716A6NP11 495 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 FAAHO00519 579 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 EIF1BO60739 113 aaKnown RBP13.03□□□□□ -0.32
CBX3-203ENST00000409747 BCAS1O75363 584 aaPredicted RBP13.03□□□□□ -0.32
CBX3-203ENST00000409747 PGM3O95394 542 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 KRT75O95678 551 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 DANCRP0C864 163 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 IDH2P48735 452 aaKnown RBP13.03□□□□□ -0.32
CBX3-203ENST00000409747 POLR2HP52434 150 aaKnown RBP13.03□□□□□ -0.32
CBX3-203ENST00000409747 SLC16A1P53985 500 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 PPP2R2BQ00005 443 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 ATG16L1Q676U5 607 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 SEZ6L2Q6UXD5 910 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 ZNF621Q6ZSS3 439 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 KBTBD8Q8NFY9 601 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 ZG16BQ96DA0 208 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 RADILQ96JH8 1075 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 TEX37Q96LM6 180 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 SLC38A1Q9H2H9 487 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 ALG2Q9H553 416 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 MTHFD2LQ9H903 347 aaPredicted RBP13.03□□□□□ -0.32
CBX3-203ENST00000409747 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 ZANQ9Y493 2812 aa13.03□□□□□ -0.32
CBX3-203ENST00000409747 PRAMEF27A3QJZ7 478 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 OR5H1A6NKK0 313 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 CLDN24A6NM45 220 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 OVOL3O00110 214 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 ZNF208O43345 1280 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 ZNF500O60304 480 aaPredicted RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 MRPL33O75394 65 aaKnown RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 DBIP07108 87 aaKnown RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 SOD3P08294 240 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 NR2F1P10589 423 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 IDO1P14902 403 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 IL7RP16871 459 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 EPHA3P29320 983 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 IDUAP35475 653 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 SYPL1Q16563 259 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 ADGRG3Q86Y34 549 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 ZNF440Q8IYI8 595 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 ZNF433Q8N7K0 673 aaPredicted RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 ANKFN1Q8N957 763 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 ARL5BQ96KC2 179 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 NAA11Q9BSU3 229 aaPredicted RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 TRIM2Q9C040 744 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 ASB6Q9NWX5 421 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 TMEM181Q9P2C4 612 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 MALT1Q9UDY8 824 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 MAGED1Q9Y5V3 778 aaPredicted RBP13.02□□□□□ -0.32
CBX3-203ENST00000409747 GPR45Q9Y5Y3 372 aa13.02□□□□□ -0.32
CBX3-203ENST00000409747 TMED7-TICAM2A0A0A6YYA0 188 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 CIB4A0PJX0 185 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 TMEM120BA0PK00 339 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 DPRXA6NFQ7 191 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 RFXANKO14593 260 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 SNNO75324 88 aaPredicted RBP13.02□□□□□ -0.33
CBX3-203ENST00000409747 IL6P05231 212 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 CHRM4P08173 479 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 RPS4Y1P22090 263 aaKnown RBP13.02□□□□□ -0.33
CBX3-203ENST00000409747 EDNRAP25101 427 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 SLC1A3P43003 542 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 OR2B6P58173 313 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 SLC35A1P78382 337 aa13.02□□□□□ -0.33
CBX3-203ENST00000409747 VEZF1Q14119 521 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms