RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TPI1P60174 286 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 GMFBP60983 142 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 AP1S1P61966 158 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 SNRPGP62308 76 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 RPS27AP62979 156 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 UBA52P62987 128 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 SNTB1Q13884 538 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 VEZF1Q14119 521 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 KRT33BQ14525 404 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 PTGR1Q14914 329 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 NTRK2Q16620 822 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 ZNF528Q3MIS6 628 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 PLK5Q496M5 336 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 GPRC6AQ5T6X5 926 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 FAM171A1Q5VUB5 890 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 SLC22A10Q63ZE4 541 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 NOTUMQ6P988 496 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 WDR53Q7Z5U6 358 aaPredicted RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 SLC9B2Q86UD5 537 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 LRRTM4Q86VH4 590 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 LRRC28Q86X40 367 aaPredicted RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 SPICQ8N5J4 248 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 WDSUB1Q8N9V3 476 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 OR10G2Q8NGC3 310 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 OR56B4Q8NH76 319 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 RPLP0P6Q8NHW5 317 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 CSGALNACT1Q8TDX6 532 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 GLYATL2Q8WU03 294 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 EXT2Q93063 718 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 CPNE4Q96A23 557 aaPredicted RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 ORAI1Q96D31 301 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 MRPS24Q96EL2 167 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 ATOH8Q96SQ7 321 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 CCM2Q9BSQ5 444 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 IFT27Q9BW83 186 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 ZYG11BQ9C0D3 744 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 POLR2J2Q9GZM3 115 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 ABCG5Q9H222 651 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 MROH8Q9H579 483 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 RPF1Q9H9Y2 349 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 TBC1D17Q9HA65 648 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 NIT2Q9NQR4 276 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 G6PC2Q9NQR9 355 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 PRMT8Q9NR22 394 aaPredicted RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 SERTAD4Q9NUC0 356 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 TXNL4BQ9NX01 149 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 ZNF226Q9NYT6 803 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 AKAP7Q9P0M2 348 aaPredicted RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 MGAT4CQ9UBM8 478 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 UBQLN1Q9UMX0 589 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 PPIEQ9UNP9 301 aaKnown RBP5.04□□□□□ -1.6
CLK1-202ENST00000409403 DMRT1Q9Y5R6 373 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 PTGDR2Q9Y5Y4 395 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 NOTCH2Q04721 2471 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 DOCK5Q9H7D0 1870 aa5.04□□□□□ -1.6
CLK1-202ENST00000409403 TRBV5-3A0A0A0MS03 114 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 HMSDA8MTL9 139 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 LACTBL1A8MY62 500 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 DISC1C4P0D8 188 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 J3KR12 359 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 TNFRSF11BO00300 401 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 UBE2CO00762 179 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 IMPA2O14732 288 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 CASKO14936 926 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 SCAMP1O15126 338 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 KLK8O60259 260 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 EIF3GO75821 320 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLK1-202ENST00000409403 KDM4BO94953 1096 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 PAK4O96013 591 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 MT-CYBP00156 380 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 EGFP01133 1207 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 IGHV2-70P01814 119 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 TCRBP04435 133 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 HEXAP06865 529 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 ACAA1P09110 424 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 SELLP14151 372 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 POU2F1P14859 743 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 HPGDP15428 266 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 NDUFB7P17568 137 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 OGNP20774 298 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 PAICSP22234 425 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 NFYAP23511 347 aaPredicted RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 PAX6P26367 422 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 ACADLP28330 430 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 SSTR2P30874 369 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 HOXA6P31267 233 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 GABRA5P31644 462 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 BDKRB1P46663 353 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 NUDT6P53370 316 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 ERVK-25P63136 954 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 PITPNAQ00169 270 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 CRYZQ08257 329 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 DSC1Q08554 894 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 PPP1R8Q12972 351 aaKnown RBP5.03□□□□□ -1.6
CLK1-202ENST00000409403 KIAA0040Q15053 153 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 TOMM20Q15388 145 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 SSX2Q16385 188 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 GUCA2BQ16661 112 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 KLHL26Q53HC5 615 aa5.03□□□□□ -1.6
CLK1-202ENST00000409403 RAB6CQ53S08 254 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms