RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CA14Q9ULX7 337 aa13.05□□□□□ -0.32
DUSP28-202ENST00000405954 GTF2A1LQ9UNN4 478 aa13.05□□□□□ -0.32
DUSP28-202ENST00000405954 A0A1W2PPH5 198 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 A0A1W2PRQ8 180 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 DBX1A6NMT0 343 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PCDH8O95206 1070 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ACP5P13686 325 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 TPT1P13693 172 aaKnown RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ATF1P18846 271 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 H2BFSP57053 126 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ECH1Q13011 328 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF311Q5JNZ3 666 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF626Q68DY1 528 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 TCTN3Q6NUS6 607 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ETV3LQ6ZN32 361 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 MUC20Q8N307 709 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 OR2A12Q8NGT7 310 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 LKAAEAR1Q8TD35 194 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 THEM6Q8WUY1 208 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 RNF141Q8WVD5 230 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 GHSRQ92847 366 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 C4orf36Q96KX1 117 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 DERL3Q96Q80 235 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ATG101Q9BSB4 218 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 WRAP53Q9BUR4 548 aaKnown RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 BRD9Q9H8M2 597 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PRDM5Q9NQX1 630 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CNTRLQ7Z7A1 2325 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 SBF1O95248 1867 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 DNAJC25-GNG10A0A024R161 153 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 A0A1W2PPE3 182 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 IFNA10P01566 189 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 MMP3P08254 477 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CRYBA2P53672 197 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 LSM11P83369 360 aaKnown RBP eCLIP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CAP1Q01518 475 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 TMEM201Q5SNT2 666 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 LRRTM4Q86VH4 590 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 SYNPRQ8TBG9 265 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ASIC5Q9NY37 505 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ABRACLQ9P1F3 81 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PISDQ9UG56 409 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF223Q9UK11 482 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CKAP5Q14008 2032 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 A0A0G2JLL6 359 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PIRO00625 290 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PTGESO14684 152 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ARG1P05089 322 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 KLK1P06870 262 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ABOP16442 354 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CD34P28906 385 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CTSOP43234 321 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 SOX2P48431 317 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 F2RL1P55085 397 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 WNT3P56703 355 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 MICBQ29980 383 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 RHOUQ7L0Q8 258 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PRRT2Q7Z6L0 340 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 HORMAD2Q8N7B1 307 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 DCUN1D4Q92564 292 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 DVL3Q92997 716 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
DUSP28-202ENST00000405954 AKR1E2Q96JD6 320 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 UPB1Q9UBR1 384 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PCDHGA5Q9Y5G8 931 aa13.04□□□□□ -0.32
DUSP28-202ENST00000405954 PRAMEF25A6NGN4 478 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SNRPGP15A8MWD9 76 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 PQBP1O60828 265 aaKnown RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 LILRB5O75023 590 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 GPR32O75388 356 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 MT-ND4LP03901 98 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 RB1P06400 928 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 RHOCP08134 193 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF25P17030 456 aaPredicted RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 EDNRAP25101 427 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 PBLDP30039 288 aaPredicted RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 IRS1P35568 1242 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ST8SIA6P61647 398 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 NKX6-1P78426 367 aaPredicted RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 MTAPQ13126 283 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 SMAD4Q13485 552 aaKnown RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 TEAD2Q15562 447 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 RPE65Q16518 533 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ETFRF1Q6IPR1 90 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF585AQ6P3V2 769 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 MISPQ8IVT2 679 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 UMODL1-AS1Q8N2C9 162 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 TEX26Q8N6G2 289 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
DUSP28-202ENST00000405954 OR8D1Q8WZ84 308 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 PMM1Q92871 262 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 IGSF8Q969P0 613 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 ZNF354BQ96LW1 612 aa13.03□□□□□ -0.32
DUSP28-202ENST00000405954 TMPRSS13Q9BYE2 586 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms