RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 NFATC4Q14934 902 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 ITPRIPL2Q3MIP1 535 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 CDONQ4KMG0 1287 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 RPL22L1Q6P5R6 122 aaKnown RBP9.9□□□□□ -0.83
CLIP4-204ENST00000404424 LYPD8Q6UX82 237 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 BTN2A1Q7KYR7 527 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 SSX6Q7RTT6 188 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 SIAH3Q8IW03 269 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 SLITRK4Q8IW52 837 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 OR11H7Q8NGC8 314 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 WDR92Q96MX6 357 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 CNN2Q99439 309 aaKnown RBP9.9□□□□□ -0.83
CLIP4-204ENST00000404424 PLA2G2FQ9BZM2 168 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 TMEM168Q9H0V1 697 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 ZFP64Q9NPA5 681 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 TMEM74BQ9NUR3 256 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 UCKL1Q9NWZ5 548 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 FLRT3Q9NZU0 649 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 EMC3Q9P0I2 261 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 USP36Q9P275 1121 aaKnown RBP9.9□□□□□ -0.83
CLIP4-204ENST00000404424 CHRNA9Q9UGM1 479 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 SLC23A1Q9UHI7 598 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 ZNF222Q9UK12 451 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 MGAT4AQ9UM21 535 aa9.9□□□□□ -0.83
CLIP4-204ENST00000404424 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 LOC105369274A0A096LPK9 316 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ZNF860A6NHJ4 632 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 H0YGG7 62 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ITGA10O75578 1167 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 NDUFB2O95178 105 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 APBB3O95704 486 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 GYPBP06028 91 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 CD3GP09693 182 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 CT62P0C5K7 136 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 POLR2CP19387 275 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 GIFP27352 417 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 NUDT1P36639 197 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ARF3P61204 181 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 GPM6BQ13491 265 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 FHL1Q13642 323 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 EXOSC7Q15024 291 aaKnown RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ESCO2Q56NI9 601 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ALG10BQ5I7T1 473 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 CEP78Q5JTW2 689 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 FGD2Q7Z6J4 655 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 OR4N4Q8N0Y3 316 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 OR8H1Q8NGG4 311 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 CNOT9Q92600 299 aaKnown RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 HGDQ93099 445 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 PELI1Q96FA3 418 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ERMAPQ96PL5 475 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 CITED4Q96RK1 184 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 SLCO1C1Q9NYB5 712 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 AKAP7Q9P0M2 348 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ELF5Q9UKW6 265 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ICAM5Q9UMF0 924 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ENTPD2Q9Y5L3 495 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 A6NCN8 305 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 K7EQS6 105 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ZNF749O43361 778 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 NDUFB5O43674 189 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 H2AFB2P0C5Z0 115 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 SNRPBP14678 240 aaKnown RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 TYRP1P17643 537 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 NTSR1P30989 418 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ACAA2P42765 397 aaKnown RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 SEC13P55735 322 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 PER3P56645 1201 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 DGCR2P98153 550 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 GSG1Q2KHT4 349 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 TP53I3Q53FA7 332 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 UBE2NLQ5JXB2 153 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 UNQ9370/PRO34162Q6UXP9 181 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ZNF550Q7Z398 422 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 FAM98AQ8NCA5 519 aaKnown RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 TMEM52Q8NDY8 209 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 OR52E2Q8NGJ4 325 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 OR13C5Q8NGS8 318 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 OR56B4Q8NH76 319 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 RPLP0P6Q8NHW5 317 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 DOK4Q8TEW6 326 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 SMIM4Q8WVI0 70 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ZFP3Q96NJ6 502 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 NRIP3Q9NQ35 241 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 DNAJB12Q9NXW2 375 aaKnown RBP9.89□□□□□ -0.83
CLIP4-204ENST00000404424 SCML1Q9UN30 329 aa9.89□□□□□ -0.83
CLIP4-204ENST00000404424 TRBV23OR9-2A0A075B6M9 112 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 OR6C74A6NCV1 312 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 TRABD2BA6NFA1 517 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 ZNF879B4DU55 563 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 GPRIN2O60269 458 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 GALR3O60755 368 aaPredicted RBP9.88□□□□□ -0.83
CLIP4-204ENST00000404424 TFP02787 698 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 NGFRP08138 427 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 SLC35E2P0CK97 266 aa9.88□□□□□ -0.83
CLIP4-204ENST00000404424 HIST1H1CP16403 213 aaKnown RBP9.88□□□□□ -0.83
CLIP4-204ENST00000404424 PPP2CBP62714 309 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms