RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 OLIG3Q7RTU3 272 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 MMP21Q8N119 569 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 BCL7CQ8WUZ0 217 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 OR51B6Q9H340 312 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 PCDHGA6Q9Y5G7 932 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 SERINC4A6NH21 518 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 CTDSP2O14595 271 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 IGHG1P01857 330 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TNFSF8P32971 234 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 ARSJQ5FYB0 599 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 FAM71E1Q6IPT2 247 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM64Q6YI46 380 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 AGBL5Q8NDL9 886 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TBC1D15Q8TC07 691 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 SLC6A18Q96N87 628 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 PHB2Q99623 299 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 OR10A2Q9H208 303 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 TJP1Q07157 1748 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 ZNF705EA8MWA4 302 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-204ENST00000400337 SC5DO75845 299 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 WDPCPO95876 746 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 AFMIDQ63HM1 303 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 PDFQ9HBH1 243 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 APMAPQ9HDC9 416 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 CD300AQ9UGN4 299 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
COL18A1-204ENST00000400337 GABRPO00591 440 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 IFNA2P01563 188 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 CSF1P09603 554 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 ZNF26P17031 533 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-204ENST00000400337 EPHA4P54764 986 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 ACVR1Q04771 509 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 SPOCK1Q08629 439 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 PTCRAQ6ISU1 281 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-204ENST00000400337 MUL1Q969V5 352 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 FGF22Q9HCT0 170 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 SLC6A20Q9NP91 592 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 CLDN24A6NM45 220 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 ARPC1BO15143 372 aaKnown RBP16.92■□□□□ 0.3
COL18A1-204ENST00000400337 PKLRP30613 574 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 ZNF616Q08AN1 781 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 MLF2Q15773 248 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-204ENST00000400337 XKR7Q5GH72 579 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 METRNLQ641Q3 311 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 C3P1Q6ZMU1 363 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 MBOAT2Q6ZWT7 520 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 CHPT1Q8WUD6 406 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 HINT2Q9BX68 163 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 EIF5A2Q9GZV4 153 aaKnown RBP16.92■□□□□ 0.3
COL18A1-204ENST00000400337 NUBP2Q9Y5Y2 271 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 LOC105369274A0A096LPK9 316 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 SLC5A10A0PJK1 596 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 H7C1C5 153 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 CR2P20023 1033 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 AFF3P51826 1226 aaKnown RBP16.92■□□□□ 0.3
COL18A1-204ENST00000400337 CAV3P56539 151 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 LCN6P62502 163 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM240Q5SV17 173 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 PLPP6Q8IY26 295 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 OR4N4Q8N0Y3 316 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 TCEAL3Q969E4 200 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 SGCZQ96LD1 299 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 SEMA6CQ9H3T2 930 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 SLC6A14Q9UN76 642 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 PLPP1O14494 284 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 IL1AP01583 271 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 ZDHHC11BP0C7U3 371 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 GPX2P18283 190 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 SLC22A6Q4U2R8 563 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 NHSL2Q5HYW2 709 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 METTL11BQ5VVY1 283 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 OR6C1Q96RD1 312 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 A4GALTQ9NPC4 353 aa16.92■□□□□ 0.3
COL18A1-204ENST00000400337 NAP1L6A6NFF2 107 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 PRRT4C9JH25 899 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SUSD5O60279 629 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 APOC3P02656 99 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 LRRC56Q8IYG6 542 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-204ENST00000400337 PRR18Q8N4B5 295 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SIMC1Q8NDZ2 872 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 C1GALT1Q9NS00 363 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 FGF21Q9NSA1 209 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 COL16A1Q07092 1604 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-204ENST00000400337 A0A1W2PQ09 198 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SSX5O60225 188 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TFP02787 698 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 DCNP07585 359 aaKnown RBP16.91■□□□□ 0.3
COL18A1-204ENST00000400337 CD63P08962 238 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TPMTP51580 245 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 MELKQ14680 651 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 STK11Q15831 433 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM176BQ3YBM2 270 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM53Q6P2H8 277 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 KCTD20Q7Z5Y7 419 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SLC35F3Q8IY50 421 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 PARP16Q8N5Y8 322 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 DEDD2Q8WXF8 326 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ADAMTS14Q8WXS8 1223 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TOGARAM1Q9Y4F4 1720 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms