RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ATP6V1G2-DDX39BF2Z307 99 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 H3BQF6 201 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SULT2B1O00204 365 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF264O43296 627 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 DNPH1O43598 174 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 MRPL33O75394 65 aaKnown RBP8.19□□□□□ -1.1
NEDD9-203ENST00000397378 PDE5AO76074 875 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 STAMBPO95630 424 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 HMGN2P05204 90 aaKnown RBP8.19□□□□□ -1.1
NEDD9-203ENST00000397378 VSIG8P0DPA2 414 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SERPINF1P36955 418 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SLC25A3Q00325 362 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 TGFBR3Q03167 851 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 PDE7AQ13946 482 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 CBFBQ13951 182 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 LASP1Q14847 261 aaKnown RBP8.19□□□□□ -1.1
NEDD9-203ENST00000397378 NDUFAF6Q330K2 333 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SYT14P1Q58G82 188 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 ANKRD26P1Q6NSI1 321 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 CDC73Q6P1J9 531 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 BPIFB2Q8N4F0 458 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 PIGXQ8TBF5 258 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 DCAKDQ8WVC6 231 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 CDS1Q92903 461 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 TMEM186Q96B77 213 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 PPCDCQ96CD2 204 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 ZHX1-C8orf76Q96EF9 292 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 FAM120BQ96EK7 910 aaKnown RBP8.19□□□□□ -1.1
NEDD9-203ENST00000397378 OTUB1Q96FW1 271 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-203ENST00000397378 BOD1Q96IK1 185 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 FCRL1Q96LA6 429 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 CCT7Q99832 543 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SAP130Q9H0E3 1048 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 GSTO2Q9H4Y5 243 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 MID1IP1Q9NPA3 183 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SERINC1Q9NRX5 453 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SIRT3Q9NTG7 399 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SH3BP4Q9P0V3 963 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 FBXO9Q9UK97 447 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-203ENST00000397378 MOKQ9UQ07 419 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SPEF1Q9Y4P9 236 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 CCL27Q9Y4X3 112 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 PPIAL4AQ9Y536 164 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 SEC22BO75396 215 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 PMS2P2O95744 297 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 BCL10O95999 233 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 WNT11O96014 354 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 SNRPAP09012 282 aaKnown RBP8.18□□□□□ -1.1
NEDD9-203ENST00000397378 UBL4AP11441 157 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 PPOXP50336 477 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 IDH3GP51553 393 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-203ENST00000397378 CCR4P51679 360 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 SESN3P58005 492 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 PRPS1P60891 318 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 NAA20P61599 178 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 TRIP10Q15642 601 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 EFNB3Q15768 340 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 DCST2Q5T1A1 773 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 FAHD2BQ6P2I3 314 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-203ENST00000397378 TIFABQ6ZNK6 161 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 TMCO5AQ8N6Q1 288 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 OR52E4Q8NGH9 312 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 RFWD2Q8NHY2 731 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 TMEM234Q8WY98 164 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 MTERF3Q96E29 417 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 CHMP6Q96FZ7 201 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 FAHD2AQ96GK7 314 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 LRRC37BQ96QE4 947 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 ACTRT3Q9BYD9 372 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 LAT2Q9GZY6 243 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 QRSL1Q9H0R6 528 aaKnown RBP8.18□□□□□ -1.1
NEDD9-203ENST00000397378 RAB1BQ9H0U4 201 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 KCNF1Q9H3M0 494 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 PLK3Q9H4B4 646 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 CA10Q9NS85 328 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 ZCCHC3Q9NUD5 404 aaKnown RBP8.18□□□□□ -1.1
NEDD9-203ENST00000397378 ACER3Q9NUN7 267 aa8.18□□□□□ -1.1
NEDD9-203ENST00000397378 CMYA5Q8N3K9 4069 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 LOC105371242A0A075B767 164 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 POM121CA8CG34 1229 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 POC1B-GALNT4F8VUJ3 575 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 PIN1P1O15428 100 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 AKAP10O43572 662 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 URI1O94763 535 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 SLU7O95391 586 aaKnown RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 KRT16P08779 473 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 NUDT17P0C025 328 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 SDC1P18827 310 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 PGCP20142 388 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 PAX7P23759 505 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 FKBP2P26885 142 aaKnown RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 MPGP29372 298 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 MAGEA8P43361 318 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 CLK1P49759 484 aaKnown RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 RNF144AP50876 292 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 H3F3AP84243 136 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 MERTKQ12866 999 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 SKP2Q13309 424 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 KLHL24Q6TFL4 600 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms