RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 ZNF716A6NP11 495 aa16.67■□□□□ 0.26
MCF2L-207ENST00000397024 RAMP1O60894 148 aa16.67■□□□□ 0.26
MCF2L-207ENST00000397024 CCNA2P20248 432 aa16.67■□□□□ 0.26
MCF2L-207ENST00000397024 IDH2P48735 452 aaKnown RBP16.67■□□□□ 0.26
MCF2L-207ENST00000397024 MAGOHP61326 146 aaKnown RBP16.67■□□□□ 0.26
MCF2L-207ENST00000397024 SLC9B1Q4ZJI4 515 aa16.67■□□□□ 0.26
MCF2L-207ENST00000397024 MAVSQ7Z434 540 aa16.67■□□□□ 0.26
MCF2L-207ENST00000397024 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
MCF2L-207ENST00000397024 PIWIL2Q8TC59 973 aaKnown RBP16.67■□□□□ 0.26
MCF2L-207ENST00000397024 EXOSC3Q9NQT5 275 aaKnown RBP16.67■□□□□ 0.26
MCF2L-207ENST00000397024 ZNF701Q9NV72 531 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-207ENST00000397024 TRPC5OSA6NMA1 111 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 SMAD7O15105 426 aaKnown RBP16.66■□□□□ 0.26
MCF2L-207ENST00000397024 PAX1P15863 534 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 IGHV1-2P23083 117 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 MVDP53602 400 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 CSNK2A1P68400 391 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-207ENST00000397024 CAPRIN1Q14444 709 aaKnown RBP16.66■□□□□ 0.26
MCF2L-207ENST00000397024 NXNQ6DKJ4 435 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 ABLIM2Q6H8Q1 611 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 ADAM5Q6NVV9 412 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 LRRC74BQ6ZQY2 392 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 GRINAQ7Z429 371 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 GALNT5Q7Z7M9 940 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 CCDC103Q8IW40 242 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 SLC25A43Q8WUT9 341 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-207ENST00000397024 TMEM171Q8WVE6 324 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 TLCD1Q96CP7 247 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 MAELQ96JY0 434 aaKnown RBP16.66■□□□□ 0.26
MCF2L-207ENST00000397024 MTHFD2LQ9H903 347 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-207ENST00000397024 LIPT1Q9Y234 373 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 RNF115Q9Y4L5 304 aa16.66■□□□□ 0.26
MCF2L-207ENST00000397024 JMJD1CQ15652 2540 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 IGKV3D-15A0A087WSY6 115 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 CLOCKO15516 846 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 IGHV3-9P01782 118 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 RPS4Y1P22090 263 aaKnown RBP16.65■□□□□ 0.26
MCF2L-207ENST00000397024 SLC18A1P54219 525 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 HPCAP84074 193 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 BSPH1Q075Z2 132 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 PDK3Q15120 406 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 ZNF100Q8IYN0 542 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 TRIML2Q8N7C3 387 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 OR52B2Q96RD2 323 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 MANSC1Q9H8J5 431 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 OSGIN1Q9UJX0 560 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 LAMP3Q9UQV4 416 aa16.65■□□□□ 0.26
MCF2L-207ENST00000397024 TMED7-TICAM2A0A0A6YYA0 188 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 SLC22A3O75751 556 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 CNOT4O95628 575 aaKnown RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 PMS2P2O95744 297 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 CD3EP07766 207 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 SOD3P08294 240 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 DANCRP0C864 163 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 NR2F1P10589 423 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 FOXG1P55316 489 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 OR2B6P58173 313 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 PDCD4Q53EL6 469 aaKnown RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 ATG16L1Q676U5 607 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 DNAJC14Q6Y2X3 702 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 CMIPQ8IY22 773 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 ZNF433Q8N7K0 673 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 GLB1L3Q8NCI6 653 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 ZBTB18Q99592 522 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 BDH2Q9BUT1 245 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 POTEKPQ9BYX7 375 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 ESRP2Q9H6T0 727 aaKnown RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 TMBIM4Q9HC24 238 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 RLIMQ9NVW2 624 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 TMED7Q9Y3B3 224 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 HDGFL3Q9Y3E1 203 aa16.64■□□□□ 0.25
MCF2L-207ENST00000397024 SPIN1Q9Y657 262 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-207ENST00000397024 TMEM72A0PK05 275 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 ZC3H12DA2A288 527 aaKnown RBP16.63■□□□□ 0.25
MCF2L-207ENST00000397024 RFXANKO14593 260 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 PGM3O95394 542 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 HEXAP06865 529 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 IMPDH2P12268 514 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 ETFAP13804 333 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 IDO1P14902 403 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 COX5AP20674 150 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 TACR3P29371 465 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 CLK1P49759 484 aaKnown RBP16.63■□□□□ 0.25
MCF2L-207ENST00000397024 H3F3AP84243 136 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 LRRC74AQ0VAA2 488 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 STK11Q15831 433 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 GTDC1Q4AE62 458 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 MRPL2Q5T653 305 aaKnown RBP16.63■□□□□ 0.25
MCF2L-207ENST00000397024 KBTBD8Q8NFY9 601 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 WDR60Q8WVS4 1066 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 USB1Q9BQ65 265 aaKnown RBP16.63■□□□□ 0.25
MCF2L-207ENST00000397024 NGBQ9NPG2 151 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 NPAP1Q9NZP6 1156 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 TMEM181Q9P2C4 612 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 TRAPPC4Q9Y296 219 aa16.63■□□□□ 0.25
MCF2L-207ENST00000397024 NOSIPQ9Y314 301 aaKnown RBP16.63■□□□□ 0.25
MCF2L-207ENST00000397024 ABCA2Q9BZC7 2435 aa16.62■□□□□ 0.25
MCF2L-207ENST00000397024 SLCO1B7G3V0H7 640 aa16.62■□□□□ 0.25
MCF2L-207ENST00000397024 OVOL3O00110 214 aa16.62■□□□□ 0.25
MCF2L-207ENST00000397024 KRT75O95678 551 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms