RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 IL22RA1Q8N6P7 574 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 OR13C2Q8NGS9 318 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 TRUB1Q8WWH5 349 aaKnown RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ST8SIA1Q92185 356 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 POLDIP3Q9BY77 421 aaKnown RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 KLRF1Q9NZS2 232 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 WASF3Q9UPY6 502 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 EFCAB9A8MZ26 197 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 GFRA3O60609 400 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 CDC42P60953 191 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SRSF6Q13247 344 aaKnown RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 RSPO4Q2I0M5 234 aaPredicted RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 ARSKQ6UWY0 536 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 GRINAQ7Z429 371 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 GPALPP1Q8IXQ4 340 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SIRT6Q8N6T7 355 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF563Q8TA94 476 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 THOC3Q96J01 351 aaKnown RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 PTDSS2Q9BVG9 487 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 METTL7AQ9H8H3 244 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 BATF3Q9NR55 127 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SELENONQ9NZV5 590 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 CELSR3Q9NYQ7 3312 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 CFAP47Q6ZTR5 3102 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 TMEM72A0PK05 275 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 ELOA3DA6NLF2 546 aaPredicted RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 GNB5O14775 395 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 PRKYO43930 277 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 GMFGO60234 142 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 FZD7O75084 574 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 OR7A10O76100 309 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 WT1P19544 449 aaPredicted RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SMSP52788 366 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 TPD52P55327 224 aaPredicted RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SOX8P57073 446 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SLC35A2P78381 396 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF74Q16587 644 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 ELOA3BQ3SY89 546 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SLC27A4Q6P1M0 643 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 ELOA3Q8NG57 546 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 POC1BQ8TC44 478 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SAMD8Q96LT4 415 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 RHNO1Q9BSD3 238 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 OR52D1Q9H346 318 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 SDHAF3Q9NRP4 125 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 TAS2R10Q9NYW0 307 aa11.54□□□□□ -0.56
TRIM39-204ENST00000396548 CDV3Q9UKY7 258 aaKnown RBP11.54□□□□□ -0.56
TRIM39-204ENST00000396548 XPNPEP2O43895 674 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 MPZL2O60487 215 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 SMNDC1O75940 238 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRIM39-204ENST00000396548 ASAH2BP0C7U1 165 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 GP1BBP13224 206 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 ITPKBP27987 946 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 SLC15A1P46059 708 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 OCLNQ16625 522 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 PLPPR5Q32ZL2 321 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 SMARCD3Q6STE5 483 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 MDGA2Q7Z553 956 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 FAM26EQ8N5C1 309 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 LRRC17Q8N6Y2 441 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 RNF217Q8TC41 542 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 KTI12Q96EK9 354 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-204ENST00000396548 SGTBQ96EQ0 304 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 UBQLN3Q9H347 655 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 MED17Q9NVC6 651 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 FBXL2Q9UKC9 423 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 DPPA5A6NC42 116 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 LRRN3E7EW58 273 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 SURF4O15260 269 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 EFNA2O43921 213 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TRIM3O75382 744 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-204ENST00000396548 SLC9A3P48764 834 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 AIMP2Q13155 320 aaKnown RBP11.53□□□□□ -0.56
TRIM39-204ENST00000396548 CLN3Q13286 438 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 CDK20Q8IZL9 346 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 BEST3Q8N1M1 668 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TEX47Q8TBZ9 253 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 FANK1Q8TC84 345 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TAAR8Q969N4 342 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 SGCZQ96LD1 299 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TNFRSF13CQ96RJ3 184 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 HHATLQ9HCP6 504 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 PPP4R1LQ9P1A2 415 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 MPDZO75970 2070 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TMED7-TICAM2A0A0A6YYA0 188 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 BGLAPP02818 100 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 HTR3AP46098 478 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 ALDH3B2P48448 385 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 PCYT1AP49585 367 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 CSNK2BP67870 215 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TMEM44Q2T9K0 475 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 PGGHGQ32M88 737 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 ZBED5Q49AG3 693 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF362Q5T0B9 420 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-204ENST00000396548 RPL13AP3Q6NVV1 102 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF773Q6PK81 442 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 RTL4Q6ZR62 310 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms