RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ADIPOR2Q86V24 386 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SLC15A4Q8N697 577 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 DTX3Q8N9I9 347 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF610Q8N9Z0 462 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 DEDD2Q8WXF8 326 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CNTNAP3BQ96NU0 1288 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 LHX6Q9UPM6 363 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SIT1Q9Y3P8 196 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 KNL1Q8NG31 2342 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ARPC5O15511 151 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ADAM23O75077 832 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 IL32P24001 234 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PRDX3P30048 256 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ADRA1AP35348 466 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ATP1B3P54709 279 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 FRMPD2BQ6IN97 320 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SERPINA12Q8IW75 414 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 BEST4Q8NFU0 473 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 UHRF1Q96T88 793 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SLC30A3Q99726 388 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 USB1Q9BQ65 265 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ULBP2Q9BZM5 246 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 RHBDD3Q9Y3P4 386 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 MTCL1Q9Y4B5 1905 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 GPRIN2O60269 458 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 LILRB5O75023 590 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 MRPL33O75394 65 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CPT2P23786 658 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 STK11Q15831 433 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CCNJQ5T5M9 372 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 VASNQ6EMK4 673 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 NOXA1Q86UR1 476 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ADGRG5Q8IZF4 528 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 RDH10Q8IZV5 341 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 FAM83FQ8NEG4 500 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 BRIX1Q8TDN6 353 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 DPCDQ9BVM2 203 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OR51E2Q9H255 320 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 BCORQ6W2J9 1755 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 USP54Q70EL1 1684 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 OTOFQ9HC10 1997 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TSPAN11A1L157 253 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 C1orf196B1AJZ1 125 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SULT1C2O00338 296 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SHOXO15266 292 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 HPGDSO60760 199 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 DBHP09172 617 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 CRHBPP24387 322 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 GDF1P27539 372 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 EIF2DP41214 584 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 EIF1P41567 113 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ADARB1P78563 741 aaKnown RBP5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SLC36A2Q495M3 483 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TP53I3Q53FA7 332 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 KRBOX4Q5JUW0 171 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 LPCAT3Q6P1A2 487 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PODNL1Q6PEZ8 512 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 PGAP1Q75T13 922 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ACBD4Q8NC06 268 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 ABHD11Q8NFV4 315 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 NDNFQ8TB73 568 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 HLA-CQ95604 372 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 TOMM40LQ969M1 308 aa5.1□□□□□ -1.59
VPS13C-204ENST00000395898 SCRG1O75711 98 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 KCNK2O95069 426 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 WDPCPO95876 746 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 OLFM2O95897 454 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 GABRR1P24046 479 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 VEGFBP49765 207 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 RAB38P57729 211 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ERVK-25P63136 954 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 NTHL1P78549 312 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 MAP4K2Q12851 820 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 CDKN3Q16667 212 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF684Q5T5D7 378 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 COMTD1Q86VU5 262 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 MFSD9Q8NBP5 474 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 C3orf58Q8NDZ4 430 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 OR51D1Q8NGF3 324 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 OR1J2Q8NGS2 313 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ELP4Q96EB1 424 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SENP5Q96HI0 755 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF681Q96N22 645 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 HIPK2Q9H2X6 1198 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 DDX31Q9H8H2 851 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 GJD2Q9UKL4 321 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM269A0A1B0GVZ9 245 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 KDM4EB2RXH2 506 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 HSBP1L1C9JCN9 74 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SLC16A7O60669 478 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 FGFBP1Q14512 234 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 FAM26DQ5JW98 314 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 CNEP1R1Q8N9A8 125 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ANKRD19PQ9H560 264 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 KCNJ16Q9NPI9 418 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 C1orf123Q9NWV4 160 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 KCMF1Q9P0J7 381 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 MYEF2Q9P2K5 600 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ATG4BQ9Y4P1 393 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ACTL7AQ9Y615 435 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms