RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 B3GNT2Q9NY97 397 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ACTR10Q9NZ32 417 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 COPZ2Q9P299 210 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ATG2AQ2TAZ0 1938 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 K7EQS6 105 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 FLRT2O43155 660 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 NOS1APO75052 506 aaPredicted RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 TSC22D2O75157 780 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 HOXC4P09017 264 aaPredicted RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 ACTR1BP42025 376 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 RBM34P42696 430 aaKnown RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 ACTR1AP61163 376 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 GAS6Q14393 721 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ZBTB37Q5TC79 503 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 TIGD4Q8IY51 512 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 SLC43A2Q8N370 569 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 OR52E2Q8NGJ4 325 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 OR10G6Q8NH81 332 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ADAMTS14Q8WXS8 1223 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 CTHRC1Q96CG8 243 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ERMAPQ96PL5 475 aaPredicted RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 ZFYVE21Q9BQ24 234 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 MFRPQ9BY79 579 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 EVA1AQ9H8M9 152 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 BRD7Q9NPI1 651 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 DIABLOQ9NR28 239 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 CHRNA9Q9UGM1 479 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ICAM5Q9UMF0 924 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 CAMK2AQ9UQM7 478 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 CA5BQ9Y2D0 317 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 MRPS7Q9Y2R9 242 aaKnown RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 SPACA6W5XKT8 324 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 DOCK8Q8NF50 2099 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 KIAA0100Q14667 2235 aaKnown RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 A6NCN8 305 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 LRRN3E7EW58 273 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 NKX2-2O95096 273 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 IFI6P09912 130 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 UCHL1P09936 223 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 CXCL3P19876 107 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 ACAA2P42765 397 aaKnown RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 EMDP50402 254 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 PER3P56645 1201 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 RPS11P62280 158 aaKnown RBP eCLIP17.35■□□□□ 0.37
CBX1-202ENST00000393408 FAM209AQ5JX71 171 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 SYS1Q8N2H4 156 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 OR8H1Q8NGG4 311 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 OR51Q1Q8NH59 317 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 TSACCQ96A04 125 aaPredicted RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 SMAD5Q99717 465 aaKnown RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 KXD1Q9BQD3 176 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 LRRN3Q9H3W5 708 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 OR6C74A6NCV1 312 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 ARL6IP5O75915 188 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 CCR6P51684 374 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 GBX2P52951 348 aaPredicted RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 ACTA2P62736 377 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 ACTG2P63267 376 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 GPM6BQ13491 265 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 NFATC4Q14934 902 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 HSD17B12Q53GQ0 312 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 ESPNLQ6ZVH7 1005 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 GRAMD2AQ8IUY3 354 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 ZNF614Q8N883 585 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 SDR9C7Q8NEX9 313 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 OR11H4Q8NGC9 324 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 HERVK_113Q902F9 699 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 HOXB13Q92826 284 aaPredicted RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 MYADMQ96S97 322 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 C7orf50Q9BRJ6 194 aaKnown RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 GSDMCQ9BYG8 508 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 PTTG3PQ9NZH4 202 aa17.35■□□□□ 0.37
CBX1-202ENST00000393408 ELF5Q9UKW6 265 aaPredicted RBP17.35■□□□□ 0.37
CBX1-202ENST00000393408 H0Y8X5 98 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 GSTZ1O43708 216 aaPredicted RBP17.34■□□□□ 0.37
CBX1-202ENST00000393408 CBX7O95931 251 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 ANKRD34CP0C6C1 535 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 OR2T7P0C7T2 308 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 HIST1H1CP16403 213 aaKnown RBP17.34■□□□□ 0.37
CBX1-202ENST00000393408 GGTLC2Q14390 218 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 CDONQ4KMG0 1287 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 BAIAP2L2Q6UXY1 529 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 OR2T27Q8NH04 317 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 OR4K13Q8NH42 304 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 FAM3CQ92520 227 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 RSC1A1Q92681 617 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 RERGQ96A58 199 aaPredicted RBP17.34■□□□□ 0.37
CBX1-202ENST00000393408 CNN2Q99439 309 aaKnown RBP17.34■□□□□ 0.37
CBX1-202ENST00000393408 TRIM2Q9C040 744 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 TMEM168Q9H0V1 697 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 DNAJB12Q9NXW2 375 aaKnown RBP17.34■□□□□ 0.37
CBX1-202ENST00000393408 SPATA2Q9UM82 520 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 TMA7Q9Y2S6 64 aaKnown RBP17.34■□□□□ 0.37
CBX1-202ENST00000393408 FANCMQ8IYD8 2048 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 COL4A2P08572 1712 aa17.34■□□□□ 0.37
CBX1-202ENST00000393408 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.33■□□□□ 0.37
CBX1-202ENST00000393408 GDI1P31150 447 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 RAG2P55895 527 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 ARPC4P59998 168 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms