RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CLDN15P56746 228 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 GUSBP1Q15486 140 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 SLC43A2Q8N370 569 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 RELTQ969Z4 430 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 TPD52L3Q96J77 140 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 ZNF337Q9Y3M9 751 aa11.95□□□□□ -0.5
USP44-202ENST00000393091 COLEC12Q5KU26 742 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 ZNF770Q6IQ21 691 aaPredicted RBP11.94□□□□□ -0.5
USP44-202ENST00000393091 OR14L1PQ8NHC6 308 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 CANT1Q8WVQ1 401 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 SH3YL1Q96HL8 342 aaPredicted RBP11.94□□□□□ -0.5
USP44-202ENST00000393091 NPAS1Q99742 590 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 FAM166BA8MTA8 275 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 WISP1O95388 367 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 STSP08842 583 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 FOXK1P85037 733 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 ZP4Q12836 540 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 MFSD13AQ14CX5 517 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 POU4F3Q15319 338 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 WIPI1Q5MNZ9 446 aaPredicted RBP11.94□□□□□ -0.5
USP44-202ENST00000393091 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 ZNF614Q8N883 585 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 SCAIQ8N9R8 606 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 CPT1CQ8TCG5 803 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 DNAJC9Q8WXX5 260 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 TACO1Q9BSH4 297 aaKnown RBP11.94□□□□□ -0.5
USP44-202ENST00000393091 COQ10BQ9H8M1 238 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 ASF1BQ9NVP2 202 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 DNAJB9Q9UBS3 223 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 SH3GLB1Q9Y371 365 aa11.94□□□□□ -0.5
USP44-202ENST00000393091 NPIPB13A6NJU9 1138 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 NPIPB4C9JG80 1138 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 BGLAPP02818 100 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 GABRA1P14867 456 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 ST13P50502 369 aaKnown RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 ALG10BQ5I7T1 473 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 NHLRC1Q6VVB1 395 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 WDR88Q6ZMY6 472 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 TMPRSS11FQ6ZWK6 438 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 MBOAT2Q6ZWT7 520 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 HMGN2P46Q86SG4 172 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 CISD2Q8N5K1 135 aaKnown RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 ZNF563Q8TA94 476 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 ACOT11Q8WXI4 607 aaPredicted RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 KLHL15Q96M94 604 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 NMNAT1Q9HAN9 279 aaPredicted RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 CLCF1Q9UBD9 225 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 ACACBO00763 2458 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 TRAV36DV7A0A075B6V5 113 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 IFNA8P32881 189 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 P2RY4P51582 365 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 EEF1A1P5Q5VTE0 462 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 OR5M10Q6IEU7 315 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 OR2T5Q6IEZ7 315 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 TMCO5AQ8N6Q1 288 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 OR2T29Q8NH02 315 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 CCDC124Q96CT7 223 aaKnown RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 ZFP3Q96NJ6 502 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 CHID1Q9BWS9 393 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 SLC6A15Q9H2J7 730 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 RPS6KB2Q9UBS0 482 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 LYVE1Q9Y5Y7 322 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 DSPP15924 2871 aaKnown RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 FRS3O43559 492 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 H1F0P07305 194 aaKnown RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 OR1E2P47887 323 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 SLC16A1P53985 500 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 RAC3P60763 192 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 KPNB1Q14974 876 aaKnown RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 SYT14P1Q58G82 188 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 EMC4Q5J8M3 183 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 ABLIM2Q6H8Q1 611 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 YRDCQ86U90 279 aaKnown RBP11.93□□□□□ -0.5
USP44-202ENST00000393091 SLC7A7Q9UM01 511 aa11.93□□□□□ -0.5
USP44-202ENST00000393091 IGKV3D-15A0A087WSY6 115 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 A0A1W2PNV4 684 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 SH3PXD2BA1X283 911 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 LIPT2A6NK58 231 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 E9PQ18 207 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 OR2T1O43869 369 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 RPS4XP62701 263 aaKnown RBP11.92□□□□□ -0.5
USP44-202ENST00000393091 EIF2S3LQ2VIR3 472 aaKnown RBP11.92□□□□□ -0.5
USP44-202ENST00000393091 DCST1Q5T197 706 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 NSUN5P2Q63ZY6 315 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 JSRP1Q96MG2 331 aaPredicted RBP11.92□□□□□ -0.5
USP44-202ENST00000393091 SFXN2Q96NB2 322 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 DGCR6LQ9BY27 220 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 FKRPQ9H9S5 495 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 NTN4Q9HB63 628 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 ZNF229Q9UJW7 825 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 TMEM5Q9Y2B1 443 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 AP4S1Q9Y587 144 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 FREM3P0C091 2139 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 MBD3L4A6NDZ8 208 aaPredicted RBP11.92□□□□□ -0.5
USP44-202ENST00000393091 MBD3L3A6NE82 208 aaPredicted RBP11.92□□□□□ -0.5
USP44-202ENST00000393091 MBD3L5A6NJ08 208 aaPredicted RBP11.92□□□□□ -0.5
USP44-202ENST00000393091 TAS2R41P59536 307 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 RIPK1Q13546 671 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 TMPPEQ6ZT21 453 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms