RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 BHLHE22Q8NFJ8 381 aaPredicted RBP11.32□□□□□ -0.6
GGPS1-203ENST00000391855 MAL2Q969L2 176 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 DDIT4LQ96D03 193 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 ANKRD27Q96NW4 1050 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 OPN3Q9H1Y3 402 aaPredicted RBP11.32□□□□□ -0.6
GGPS1-203ENST00000391855 EVA1AQ9H8M9 152 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 PLSCR4Q9NRQ2 329 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 ANGPT4Q9Y264 503 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 TMED7-TICAM2A0A0A6YYA0 188 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 A0A1W2PNR3 127 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 PRORSD1PA6NEY8 169 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 A6NNC1 897 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 SULT2B1O00204 365 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 AP3D1O14617 1153 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 CYTIPO60759 359 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 ADAM11O75078 769 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 PMS2P2O95744 297 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 TFPIP10646 304 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 SLC6A2P23975 617 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 TACR3P29371 465 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 KCNJ5P48544 419 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 DIO1P49895 249 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 SCARB2Q14108 478 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 TRMT5Q32P41 509 aaKnown RBP11.31□□□□□ -0.6
GGPS1-203ENST00000391855 CGB2Q6NT52 195 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
GGPS1-203ENST00000391855 BEND4Q6ZU67 534 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 ADGRG3Q86Y34 549 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 SLC30A8Q8IWU4 369 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF610Q8N9Z0 462 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 C11orf65Q8NCR3 313 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 HIPK4Q8NE63 616 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 NFKBIDQ8NI38 313 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 ABHD3Q8WU67 409 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 ROBO4Q8WZ75 1007 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF607Q96SK3 696 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 SH3GL1Q99961 368 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 OSGIN1Q9UJX0 560 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 CLEC4AQ9UMR7 237 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 TMED7Q9Y3B3 224 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 NOTCH2Q04721 2471 aa11.31□□□□□ -0.6
GGPS1-203ENST00000391855 FAM221AA4D161 298 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 SH3D21A4FU49 640 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 SMAD9O15198 467 aaKnown RBP11.3□□□□□ -0.6
GGPS1-203ENST00000391855 SERPINB7O75635 380 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 CTAG2O75638 210 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 NPPAP01160 153 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 FESP07332 822 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 YES1P07947 543 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 PPP3CBP16298 524 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 ACAA2P42765 397 aaKnown RBP11.3□□□□□ -0.6
GGPS1-203ENST00000391855 KLF10Q13118 480 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 CYLC2Q14093 348 aaPredicted RBP11.3□□□□□ -0.6
GGPS1-203ENST00000391855 PDK3Q15120 406 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 CYP51A1Q16850 503 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 DHRS4L2Q6PKH6 230 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 MTDHQ86UE4 582 aaKnown RBP11.3□□□□□ -0.6
GGPS1-203ENST00000391855 PIGXQ8TBF5 258 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 ADAM19Q9H013 955 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 OR10A4Q9H209 315 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 IKZF5Q9H5V7 419 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 SAR1AQ9NR31 198 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 RASSF1Q9NS23 344 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 RLIMQ9NVW2 624 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 KLHL28Q9NXS3 571 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 EMC3Q9P0I2 261 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 TMEM181Q9P2C4 612 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 SLC13A4Q9UKG4 626 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 EDARQ9UNE0 448 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 TRAPPC4Q9Y296 219 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 TESMINQ9Y4I5 508 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 CAPN7Q9Y6W3 813 aa11.3□□□□□ -0.6
GGPS1-203ENST00000391855 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
GGPS1-203ENST00000391855 CELSR2Q9HCU4 2923 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF724A8MTY0 619 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 CASKO14936 926 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 EIF1BO60739 113 aaKnown RBP11.29□□□□□ -0.6
GGPS1-203ENST00000391855 CXCR1P25024 350 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 UGT2B10P36537 528 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 SLC35A1P78382 337 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 FAM27E3Q08E93 113 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 SNTB1Q13884 538 aaKnown RBP11.29□□□□□ -0.6
GGPS1-203ENST00000391855 MMEL1Q495T6 779 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 ABLIM2Q6H8Q1 611 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 NET1Q7Z628 596 aaPredicted RBP11.29□□□□□ -0.6
GGPS1-203ENST00000391855 SERPINA11Q86U17 422 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 CDH24Q86UP0 819 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 CLIP4Q8N3C7 705 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 PCYOX1LQ8NBM8 494 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF317Q96PQ6 595 aaPredicted RBP11.29□□□□□ -0.6
GGPS1-203ENST00000391855 PSD2Q9BQI7 771 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 POTEKPQ9BYX7 375 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 C12orf10Q9HB07 376 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms