RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 KRT71Q3SY84 523 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 GPAT3Q53EU6 434 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 SAXO2Q658L1 398 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 TYW3Q6IPR3 259 aaKnown RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 C17orf78Q8N4C9 275 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 LILRB1Q8NHL6 650 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 AENQ8WTP8 325 aaKnown RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF300Q96RE9 604 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 ZBTB18Q99592 522 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 SLC35A5Q9BS91 424 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 RHNO1Q9BSD3 238 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 TRAF4Q9BUZ4 470 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 CCDC106Q9BWC9 280 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 QRSL1Q9H0R6 528 aaKnown RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 SLCO5A1Q9H2Y9 848 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 SERHL2Q9H4I8 314 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 CACYBPQ9HB71 228 aaKnown RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 MALT1Q9UDY8 824 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 PRSS50Q9UI38 385 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 BTNL2Q9UIR0 455 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 ING1Q9UK53 422 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-204ENST00000376643 POU2F3Q9UKI9 436 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 SLC9A8Q9Y2E8 581 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 HEATR5AQ86XA9 2040 aa13.04□□□□□ -0.32
HDAC6-204ENST00000376643 TLN2Q9Y4G6 2542 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 DPRXA6NFQ7 191 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 RNF223E7ERA6 249 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ABCD4O14678 606 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF208O43345 1280 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 CPSF4O95639 269 aaKnown RBP13.03□□□□□ -0.32
HDAC6-204ENST00000376643 IGHV1-2P23083 117 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 FAPQ12884 760 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 CASP8Q14790 479 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ZSWIM7Q19AV6 140 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF440Q8IYI8 595 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 FBXL14Q8N1E6 418 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 MREGQ8N565 214 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF433Q8N7K0 673 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 C1orf162Q8NEQ5 155 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-204ENST00000376643 ZNF75CPQ92670 426 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-204ENST00000376643 TRNT1Q96Q11 434 aaKnown RBP13.03□□□□□ -0.32
HDAC6-204ENST00000376643 CTPS2Q9NRF8 586 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 TMEM181Q9P2C4 612 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 KCNE5Q9UJ90 142 aa13.03□□□□□ -0.32
HDAC6-204ENST00000376643 FAAHO00519 579 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 RAD51DO75771 328 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 RYKP34925 604 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 CDKN1AP38936 164 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 SLC1A6P48664 564 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 POLR2HP52434 150 aaKnown RBP13.02□□□□□ -0.33
HDAC6-204ENST00000376643 GSTA3Q16772 222 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 PGGHGQ32M88 737 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 OGFOD2Q6N063 350 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF544Q6NX49 715 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 SLC22A25Q6T423 547 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 KLHL24Q6TFL4 600 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 CLEC2AQ6UVW9 174 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 FRRS1Q6ZNA5 592 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 ANKRD46Q86W74 232 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 PRIMA1Q86XR5 153 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-204ENST00000376643 GLB1L3Q8NCI6 653 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-204ENST00000376643 PPP1R36Q96LQ0 422 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 CCDC115Q96NT0 180 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 PANX1Q96RD7 426 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 DHRS9Q9BPW9 319 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 PIF1Q9H611 641 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 FKRPQ9H9S5 495 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 CBLN4Q9NTU7 201 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 CALML5Q9NZT1 146 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 UPB1Q9UBR1 384 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 HAO1Q9UJM8 370 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 AMDHD2Q9Y303 409 aa13.02□□□□□ -0.33
HDAC6-204ENST00000376643 WDR91A4D1P6 747 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF716A6NP11 495 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 SHISA9B4DS77 424 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 CD5LO43866 347 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 SCN2BO60939 215 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 KRT75O95678 551 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 DBIP07108 87 aaKnown RBP13.01□□□□□ -0.33
HDAC6-204ENST00000376643 CSF3P09919 207 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 IL7RP16871 459 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 IDH2P48735 452 aaKnown RBP13.01□□□□□ -0.33
HDAC6-204ENST00000376643 NUDT6P53370 316 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 OR2B6P58173 313 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 STX3Q13277 289 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 FAM174BQ3ZCQ3 159 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 SPANXN4Q5MJ08 99 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 LRRC74BQ6ZQY2 392 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 SPATA19Q7Z5L4 167 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 PEX5LQ8IYB4 626 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 SPATA3Q8NHX4 192 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms