RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 PLAURQ03405 335 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 ADAM5Q6NVV9 412 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 GALNT5Q7Z7M9 940 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 ZNF100Q8IYN0 542 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 ANKFN1Q8N957 763 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 MGARPQ8TDB4 240 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 CNOT9Q92600 299 aaKnown RBP12.6□□□□□ -0.39
NELFE-201ENST00000375425 ARL5BQ96KC2 179 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 MTHFD2LQ9H903 347 aaPredicted RBP12.6□□□□□ -0.39
NELFE-201ENST00000375425 EXOSC3Q9NQT5 275 aaKnown RBP12.6□□□□□ -0.39
NELFE-201ENST00000375425 LIPT1Q9Y234 373 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 HDGFL3Q9Y3E1 203 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 RNF115Q9Y4L5 304 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 USF3Q68DE3 2245 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 TMCC2O75069 709 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 CHRM4P08173 479 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 CCNA2P20248 432 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 IGHV1-2P23083 117 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 LRRC74AQ0VAA2 488 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 STK11Q15831 433 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 COX20Q5RI15 118 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 NXNQ6DKJ4 435 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 LRRC74BQ6ZQY2 392 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 CCDC103Q8IW40 242 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 PIWIL2Q8TC59 973 aaKnown RBP12.59□□□□□ -0.39
NELFE-201ENST00000375425 PNPT1Q8TCS8 783 aaKnown RBP12.59□□□□□ -0.39
NELFE-201ENST00000375425 ZBTB18Q99592 522 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 POTEKPQ9BYX7 375 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 OR11A1Q9GZK7 315 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 SLC38A1Q9H2H9 487 aa12.59□□□□□ -0.39
NELFE-201ENST00000375425 RAI1Q7Z5J4 1906 aaPredicted RBP12.59□□□□□ -0.39
NELFE-201ENST00000375425 IGKV3D-15A0A087WSY6 115 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 DPRXA6NFQ7 191 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 AGAP5A6NIR3 686 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 PMS2P2O95744 297 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 IGHV3-9P01782 118 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 NR2F1P10589 423 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 IL7RP16871 459 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 NTF4P34130 210 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 HTR3AP46098 478 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 CLK1P49759 484 aaKnown RBP12.58□□□□□ -0.4
NELFE-201ENST00000375425 ANXA11P50995 505 aaKnown RBP12.58□□□□□ -0.4
NELFE-201ENST00000375425 ATP5J2P56134 94 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 TXNL4AP83876 142 aaKnown RBP12.58□□□□□ -0.4
NELFE-201ENST00000375425 BSPH1Q075Z2 132 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 PDK3Q15120 406 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 ATG16L1Q676U5 607 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 SEZ6L2Q6UXD5 910 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 CMIPQ8IY22 773 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 GLB1L3Q8NCI6 653 aaPredicted RBP12.58□□□□□ -0.4
NELFE-201ENST00000375425 SMAP2Q8WU79 429 aaPredicted RBP12.58□□□□□ -0.4
NELFE-201ENST00000375425 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 FBXW5Q969U6 566 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 MUCL1Q96DR8 90 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 ZHX1-C8orf76Q96EF9 292 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 EMC3Q9P0I2 261 aa12.58□□□□□ -0.4
NELFE-201ENST00000375425 NOSIPQ9Y314 301 aaKnown RBP12.58□□□□□ -0.4
NELFE-201ENST00000375425 ANK3Q12955 4377 aaKnown RBP12.58□□□□□ -0.4
NELFE-201ENST00000375425 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 SLCO1B7G3V0H7 640 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 RFXANKO14593 260 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 AP3D1O14617 1153 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 SLC22A3O75751 556 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 KRT75O95678 551 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 IL6P05231 212 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 SOD3P08294 240 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 DANCRP0C864 163 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 GGT1P19440 569 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 COX5AP20674 150 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 OR2B6P58173 313 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 MAGOHP61326 146 aaKnown RBP12.57□□□□□ -0.4
NELFE-201ENST00000375425 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
NELFE-201ENST00000375425 GNA13Q14344 377 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 PPA1Q15181 289 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 ZNF672Q499Z4 452 aaPredicted RBP12.57□□□□□ -0.4
NELFE-201ENST00000375425 TIMM23BQ5SRD1 257 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 FBXW9Q5XUX1 488 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 LSRQ86X29 649 aaPredicted RBP12.57□□□□□ -0.4
NELFE-201ENST00000375425 UBE2J2Q8N2K1 259 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 ZNF433Q8N7K0 673 aaPredicted RBP12.57□□□□□ -0.4
NELFE-201ENST00000375425 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
NELFE-201ENST00000375425 MANSC1Q9H8J5 431 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 SLC6A13Q9NSD5 602 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 TMEM181Q9P2C4 612 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 OSGIN1Q9UJX0 560 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 TRAPPC4Q9Y296 219 aa12.57□□□□□ -0.4
NELFE-201ENST00000375425 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
NELFE-201ENST00000375425 TMED7-TICAM2A0A0A6YYA0 188 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 TMEM72A0PK05 275 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 CFAP73A6NFT4 308 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 OVOL3O00110 214 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 GPR171O14626 319 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 DNPH1O43598 174 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 RAMP1O60894 148 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 PGM3O95394 542 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 DBIP07108 87 aaKnown RBP12.56□□□□□ -0.4
NELFE-201ENST00000375425 IDO1P14902 403 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 RPS4Y1P22090 263 aaKnown RBP12.56□□□□□ -0.4
NELFE-201ENST00000375425 TACR3P29371 465 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms