RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 PGCP20142 388 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 SLC1A6P48664 564 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 UFM1P61960 85 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 PPP2R2BQ00005 443 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 MAPK11Q15759 364 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 SYPL1Q16563 259 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 SMU1Q2TAY7 513 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 TIMM23BQ5SRD1 257 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 B3GLCTQ6Y288 498 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 DNAJC14Q6Y2X3 702 aaPredicted RBP11.59□□□□□ -0.55
RPF1-201ENST00000370654 HOMEZQ8IX15 550 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 OR52E4Q8NGH9 312 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 GTPBP3Q969Y2 492 aaKnown RBP11.59□□□□□ -0.55
RPF1-201ENST00000370654 TESCQ96BS2 214 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 NEURL3Q96EH8 262 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 SLC35A5Q9BS91 424 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 C1QTNF6Q9BXI9 259 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 SERINC1Q9NRX5 453 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 EXD2Q9NVH0 621 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 CHRNA9Q9UGM1 479 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 B3GALT5Q9Y2C3 310 aa11.59□□□□□ -0.55
RPF1-201ENST00000370654 TMEM72A0PK05 275 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 ZC3H12DA2A288 527 aaKnown RBP11.58□□□□□ -0.56
RPF1-201ENST00000370654 OR5H1A6NKK0 313 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 GPRIN2O60269 458 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 ITGA5P08648 1049 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 IDH2P48735 452 aaKnown RBP11.58□□□□□ -0.56
RPF1-201ENST00000370654 RPL14P50914 215 aaKnown RBP11.58□□□□□ -0.56
RPF1-201ENST00000370654 ZNF83P51522 516 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 CDH11P55287 796 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 IRX1P78414 480 aaPredicted RBP11.58□□□□□ -0.56
RPF1-201ENST00000370654 KCNJ10P78508 379 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 SLC25A3Q00325 362 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 KRT71Q3SY84 523 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 FAM174BQ3ZCQ3 159 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 COX20Q5RI15 118 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 FBXW9Q5XUX1 488 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 DTX2Q86UW9 622 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 RNF130Q86XS8 419 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 WDR31Q8NA23 367 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 ZNF563Q8TA94 476 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 TMEM234Q8WY98 164 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 TRIM44Q96DX7 344 aaPredicted RBP11.58□□□□□ -0.56
RPF1-201ENST00000370654 ZIM3Q96PE6 472 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 SLC38A1Q9H2H9 487 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 NGBQ9NPG2 151 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 SLC6A13Q9NSD5 602 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 MARCOQ9UEW3 520 aaPredicted RBP11.58□□□□□ -0.56
RPF1-201ENST00000370654 HAO1Q9UJM8 370 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 NOSIPQ9Y314 301 aaKnown RBP11.58□□□□□ -0.56
RPF1-201ENST00000370654 SLC25A15Q9Y619 301 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 ABCA1O95477 2261 aa11.58□□□□□ -0.56
RPF1-201ENST00000370654 A0A096LNT2 108 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 GOLGA8QA0A0J9YX86 632 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 GOLGA8OA6NCC3 632 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 GOLGA8NF8WBI6 632 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 SDHDO14521 159 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 BIRC5O15392 142 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 PMS2P2O95744 297 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 GSNP06396 782 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 GUSBP08236 651 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 MYZAPP0CAP1 466 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 LBPP18428 481 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 IDUAP35475 653 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 APOBEC1P41238 236 aaKnown RBP11.57□□□□□ -0.56
RPF1-201ENST00000370654 OR2B6P58173 313 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 H3F3AP84243 136 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 PDK3Q15120 406 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 GPAT3Q53EU6 434 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 TNFAIP8L3Q5GJ75 292 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 ANXA8L1Q5VT79 327 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 C9orf135Q5VTT2 229 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 C11orf71Q6IPW1 123 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 WDR93Q6P2C0 686 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 GRINAQ7Z429 371 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 UBE2J2Q8N2K1 259 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
RPF1-201ENST00000370654 TRMT61AQ96FX7 289 aaKnown RBP11.57□□□□□ -0.56
RPF1-201ENST00000370654 CCDC115Q96NT0 180 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 MEAF6Q9HAF1 191 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 OSGIN1Q9UJX0 560 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 PCDHGB4Q9UN71 923 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 SLC35A3Q9Y2D2 325 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 CHD3Q12873 2000 aaKnown RBP11.57□□□□□ -0.56
RPF1-201ENST00000370654 RTTNQ86VV8 2226 aa11.57□□□□□ -0.56
RPF1-201ENST00000370654 IGHV4-30-2A0A087WSY4 118 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 TMED7-TICAM2A0A0A6YYA0 188 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 E9PBE3 544 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 PDLIM1O00151 329 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 SSX4O60224 188 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 S100A3P33764 101 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 CHI3L1P36222 383 aaPredicted RBP11.56□□□□□ -0.56
RPF1-201ENST00000370654 KHKP50053 298 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 SLC16A1P53985 500 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 CSNK2A1P68400 391 aaPredicted RBP11.56□□□□□ -0.56
RPF1-201ENST00000370654 DMTNQ08495 405 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 BST1Q10588 318 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 GABRA6Q16445 453 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 ATAD3BQ5T9A4 648 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms