RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ITPKBP27987 946 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 SLC6A6P31641 620 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 CCR4P51679 360 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 FOXL2P58012 376 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 PRPS1P60891 318 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC197-201ENST00000359253 CHAF1BQ13112 559 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 TMED1Q13445 227 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 DNASE1L3Q13609 305 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 PGGHGQ32M88 737 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 KLHL22Q53GT1 634 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 RNLSQ5VYX0 342 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 ACSM5Q6NUN0 579 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 CBLN3Q6UW01 205 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 LYPD8Q6UX82 237 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 GRINAQ7Z429 371 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 OAFQ86UD1 273 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 RAB43Q86YS6 212 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 TCEANCQ8N8B7 351 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 GATSQ8NAP1 163 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 OR6S1Q8NH40 331 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 FANK1Q8TC84 345 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 GGHQ92820 318 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
CCDC197-201ENST00000359253 CRELD1Q96HD1 420 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 SIGLEC11Q96RL6 698 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 CCDC90BQ9GZT6 254 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
CCDC197-201ENST00000359253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC197-201ENST00000359253 TEX51A0A1B0GUA7 166 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 ENO4A6NNW6 628 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 CDC42EP2O14613 210 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 SURF4O15260 269 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 RRP8O43159 456 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 PRODHO43272 600 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 TLX2O43763 284 aaPredicted RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 IDH3BO43837 385 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 OR2J2O76002 312 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 IGFBP1P08833 259 aaPredicted RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 CXCR1P25024 350 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 FKBP2P26885 142 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 EIF2S3P41091 472 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 SLC15A1P46059 708 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 RNF144AP50876 292 aaPredicted RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 POLR2HP52434 150 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 FBXW4P57775 412 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 CRYZQ08257 329 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 NDUFAF6Q330K2 333 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 FAM69BQ5VUD6 431 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 SLC30A6Q6NXT4 461 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 JMJD6Q6NYC1 403 aaPredicted RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 PPP1R32Q7Z5V6 425 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 DTX1Q86Y01 620 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 GPALPP1Q8IXQ4 340 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 LNX2Q8N448 690 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 STX19Q8N4C7 294 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 OR8D4Q8NGM9 314 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 STK35Q8TDR2 534 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 GPR119Q8TDV5 335 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 DUSP19Q8WTR2 217 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 RORBQ92753 470 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 RNF31Q96EP0 1072 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 SAMD8Q96LT4 415 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 RASL10BQ96S79 203 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 CDCA4Q9BXL8 241 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 PLA2G12AQ9BZM1 189 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 RBM38Q9H0Z9 239 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 UBQLN3Q9H347 655 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 DSN1Q9H410 356 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 ATP13A2Q9NQ11 1180 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 C20orf141Q9NUB4 165 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 MRPS18AQ9NVS2 196 aaKnown RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 PAK1IP1Q9NWT1 392 aaPredicted RBP12.3□□□□□ -0.44
CCDC197-201ENST00000359253 TAS2R10Q9NYW0 307 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 ERVK-18Q9QC07 812 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 SSUH2Q9Y2M2 353 aa12.3□□□□□ -0.44
CCDC197-201ENST00000359253 A0A087WV48 116 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 ZNF99A8MXY4 864 aaPredicted RBP12.29□□□□□ -0.44
CCDC197-201ENST00000359253 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
CCDC197-201ENST00000359253 OIP5O43482 229 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 RAD1O60671 282 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 ITGA10O75578 1167 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 SLC25A12O75746 678 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 SEC14L2O76054 403 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 OR7A10O76100 309 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 NDUFB2O95178 105 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 NUDT14O95848 222 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 SERPINA7P05543 415 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 HTR1AP08908 422 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 LIPCP11150 499 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 FUT1P19526 365 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 PCMT1P22061 227 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 TACR3P29371 465 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 APOBEC1P41238 236 aaKnown RBP12.29□□□□□ -0.44
CCDC197-201ENST00000359253 SSR4P51571 173 aa12.29□□□□□ -0.44
CCDC197-201ENST00000359253 GAS1P54826 345 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms