RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 DCDC2BA2VCK2 349 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 HTR3EA5X5Y0 456 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 FMO3P31513 532 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 POLR2HP52434 150 aaKnown RBP15.5■□□□□ 0.07
TPM1-205ENST00000357980 SMSP52788 366 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 CDH15P55291 814 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 INPP5JQ15735 1006 aaPredicted RBP15.5■□□□□ 0.07
TPM1-205ENST00000357980 SMN1Q16637 294 aaKnown RBP15.5■□□□□ 0.07
TPM1-205ENST00000357980 ARSKQ6UWY0 536 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 SLC46A3Q7Z3Q1 461 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 FADS6Q8N9I5 356 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 WDSUB1Q8N9V3 476 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 FANK1Q8TC84 345 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 SGTBQ96EQ0 304 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 FER1L6-AS2Q96M78 137 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 OR52D1Q9H346 318 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 HHATLQ9HCP6 504 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 TBC1D23Q9NUY8 699 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 PCDHGB6Q9Y5F9 930 aa15.5■□□□□ 0.07
TPM1-205ENST00000357980 ANKRD33BA6NCL7 494 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 TRIM64CA6NLI5 447 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 PTP4A3O75365 173 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 PRKCAP17252 672 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 HLCSP50747 726 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 SNRPGP62308 76 aaKnown RBP15.49■□□□□ 0.07
TPM1-205ENST00000357980 SRSF6Q13247 344 aaKnown RBP15.49■□□□□ 0.07
TPM1-205ENST00000357980 TOP3AQ13472 1001 aaPredicted RBP15.49■□□□□ 0.07
TPM1-205ENST00000357980 CLEC12AQ5QGZ9 265 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 ATP1A1-AS1Q5TC04 95 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 SLC22A10Q63ZE4 541 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 RTL4Q6ZR62 310 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 BEST3Q8N1M1 668 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 OR2M3Q8NG83 312 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 TMEM234Q8WY98 164 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 SAMD8Q96LT4 415 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 TSSK6Q9BXA6 273 aa15.49■□□□□ 0.07
TPM1-205ENST00000357980 MRPS26Q9BYN8 205 aaKnown RBP15.49■□□□□ 0.07
TPM1-205ENST00000357980 TRAV27A0A087WT01 109 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 XPNPEP2O43895 674 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 MPZL2O60487 215 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 CXCR1P25024 350 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 EFNB1P98172 346 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 RPL13AP3Q6NVV1 102 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 CASP12Q6UXS9 341 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 PTCHD4Q6ZW05 846 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 MDGA2Q7Z553 956 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 OAFQ86UD1 273 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 ZNF227Q86WZ6 799 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 ADGRG3Q86Y34 549 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 GPALPP1Q8IXQ4 340 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 CYP4Z2PQ8N1L4 340 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 BPIFB6Q8NFQ5 453 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 OR4Q3Q8NH05 313 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 TRUB1Q8WWH5 349 aaKnown RBP15.48■□□□□ 0.07
TPM1-205ENST00000357980 LIPHQ8WWY8 451 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 NXPE2Q96DL1 559 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 NPAS1Q99742 590 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 LHPPQ9H008 270 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 ENKD1Q9H0I2 346 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 MCCC2Q9HCC0 563 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 MED17Q9NVC6 651 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 PAK1IP1Q9NWT1 392 aaPredicted RBP15.48■□□□□ 0.07
TPM1-205ENST00000357980 FBXL2Q9UKC9 423 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 BLOC1S6Q9UL45 172 aa15.48■□□□□ 0.07
TPM1-205ENST00000357980 TMED7-TICAM2A0A0A6YYA0 188 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 TRABD2BA6NFA1 517 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 LRRN3E7EW58 273 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 HCN1O60741 890 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 OR7A10O76100 309 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 RCBTB2O95199 551 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 ATP6V1B1P15313 513 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 HTR3AP46098 478 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 GABARAPL2P60520 117 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 ZNF74Q16587 644 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 PLPPR5Q32ZL2 321 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 SLC25A53Q5H9E4 307 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 SMARCD3Q6STE5 483 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 THSD4Q6ZMP0 1018 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 LRRC17Q8N6Y2 441 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 CLEC1AQ8NC01 280 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 OR8J1Q8NGP2 316 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 SGCDQ92629 289 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 FGF11Q92914 225 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 KTI12Q96EK9 354 aaPredicted RBP15.47■□□□□ 0.07
TPM1-205ENST00000357980 POLDIP3Q9BY77 421 aaKnown RBP15.47■□□□□ 0.07
TPM1-205ENST00000357980 UBQLN3Q9H347 655 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 ANKRD10Q9NXR5 420 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 IL20RAQ9UHF4 553 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 TEKT2Q9UIF3 430 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 TMED7Q9Y3B3 224 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 PRKYO43930 277 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 SUSD5O60279 629 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 NPIPB7O75200 414 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 CH25HO95992 272 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 WT1P19544 449 aaPredicted RBP15.47■□□□□ 0.07
TPM1-205ENST00000357980 ITGA3P26006 1051 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 SLC9A3P48764 834 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 PCYT1AP49585 367 aa15.47■□□□□ 0.07
TPM1-205ENST00000357980 RPS4XP62701 263 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms