RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TUBA3CQ13748 450 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 APOFQ13790 326 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 ELOA3BQ3SY89 546 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 TUBA3EQ6PEY2 450 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 LINC00696Q6ZRV3 163 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 KIF18BQ86Y91 864 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 ENTHD1Q8IYW4 607 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 ZNF248Q8NDW4 579 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 TSPAN14Q8NG11 270 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 ELOA3Q8NG57 546 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 ZNF566Q969W8 418 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 C12orf10Q9HB07 376 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 GPR83Q9NYM4 423 aa16.48■□□□□ 0.23
SMARCD3-202ENST00000356800 H3BN98 237 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 NEURL1O76050 574 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 WDPCPO95876 746 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 CCDC159P0C7I6 412 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 PRKCAP17252 672 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 FUT1P19526 365 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 CRHBPP24387 322 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 POU1F1P28069 291 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 CDC42P60953 191 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 OC90Q02509 493 aaPredicted RBP16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 SLX4IPQ5VYV7 408 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 PSD4Q8NDX1 1056 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 SNIP1Q8TAD8 396 aaKnown RBP16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 FAM81AQ8TBF8 368 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 BPIFA2Q96DR5 249 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 SIGLEC12Q96PQ1 595 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 DPH1Q9BZG8 443 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 MED17Q9NVC6 651 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 PLA2G3Q9NZ20 509 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 TMEM5Q9Y2B1 443 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 NCKAP5O14513 1909 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 CFAP47Q6ZTR5 3102 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 FRYQ5TBA9 3013 aa16.47■□□□□ 0.23
SMARCD3-202ENST00000356800 ETV2O00321 342 aaPredicted RBP16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 SNPHO15079 494 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 DLX5P56178 289 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TEKQ02763 1124 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 EGR4Q05215 589 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 SPINK14Q6IE38 97 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TMPRSS11FQ6ZWK6 438 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 GRINAQ7Z429 371 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 PLCZ1Q86YW0 608 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 CDK20Q8IZL9 346 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 CLDN22Q8N7P3 220 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 RHOXF1Q8NHV9 184 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 CNIH3Q8TBE1 160 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 ST8SIA1Q92185 356 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 UTP23Q9BRU9 249 aaKnown RBP16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 SACM1LQ9NTJ5 587 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 DEPPQ9NTK1 212 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 LRFN1Q9P244 771 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 BLOC1S6Q9UL45 172 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 RNF6Q9Y252 685 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 CEP295Q9C0D2 2601 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 LOC400499M0QZD8 3231 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 ENO4A6NNW6 628 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 MPZL2O60487 215 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TRIM3O75382 744 aaPredicted RBP16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 CLPTM1O96005 669 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 P04436 131 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 DNASE1L1P49184 302 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 POLR2HP52434 150 aaKnown RBP16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TUBA4AP68366 448 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 CRYZQ08257 329 aaKnown RBP16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 DEFB109BQ30KR1 87 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 PLPPR5Q32ZL2 321 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 AGAP7PQ5VUJ5 663 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 BROXQ5VW32 411 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TMEM236Q5W0B7 351 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 C12orf73Q69YU5 71 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 POMZP3Q6PJE2 187 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 ADGRG3Q86Y34 549 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 UBE2FQ969M7 185 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TMEM41AQ96HV5 264 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 AGAP4Q96P64 663 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 TMEM43Q9BTV4 400 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 PLA2G12AQ9BZM1 189 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 SLC19A3Q9BZV2 496 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 EGLN3Q9H6Z9 239 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 ZNF552Q9H707 407 aaPredicted RBP16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 IL20Q9NYY1 176 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 ABI3Q9P2A4 366 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 VDAC3Q9Y277 283 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
SMARCD3-202ENST00000356800 APC2O95996 2303 aa16.46■□□□□ 0.22
SMARCD3-202ENST00000356800 FREM3P0C091 2139 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 A0A087WXM4 84 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 TMED7-TICAM2A0A0A6YYA0 188 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 TRIM64CA6NLI5 447 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 WBP4O75554 376 aaKnown RBP16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 GABRB1P18505 474 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 CCNA2P20248 432 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 GIPRP48546 466 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 CSNK2BP67870 215 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 CDK5Q00535 292 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms