RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 AK1P00568 194 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 IGHV3-9P01782 118 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 OR12D1P0DN82 309 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 CDH11P55287 796 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 PDCD2Q16342 344 aaPredicted RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 SAXO2Q658L1 398 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 ANKRD46Q86W74 232 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 ZNF781Q8N8C0 355 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 OR8J2Q8NGG1 315 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 RAB8BQ92930 207 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 GTPBP3Q969Y2 492 aaKnown RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 ZG16BQ96DA0 208 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 TRMT61AQ96FX7 289 aaKnown RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 PPP1R36Q96LQ0 422 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 PRPF18Q99633 342 aaKnown RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 USB1Q9BQ65 265 aaKnown RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 GRIP2Q9C0E4 1043 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 SAP130Q9H0E3 1048 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 AKTIPQ9H8T0 292 aa13.98□□□□□ -0.17
PDGFA-201ENST00000354513 CISD1Q9NZ45 108 aaKnown RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 NOP53Q9NZM5 478 aaKnown RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 HEATR1Q9H583 2144 aaKnown RBP13.98□□□□□ -0.17
PDGFA-201ENST00000354513 ATRQ13535 2644 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 OR5H1A6NKK0 313 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 E7EQL1 145 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 ABCD4O14678 606 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 CD5LO43866 347 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 RAD51DO75771 328 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 GUSBP08236 651 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 PGCP20142 388 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 IRX1P78414 480 aaPredicted RBP13.97□□□□□ -0.17
PDGFA-201ENST00000354513 PDK3Q15120 406 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 SMU1Q2TAY7 513 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 TNFAIP8L2Q6P589 184 aaPredicted RBP13.97□□□□□ -0.17
PDGFA-201ENST00000354513 GALNT5Q7Z7M9 940 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 ARFGAP2Q8N6H7 521 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 OR4A15Q8NGL6 344 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 OR11A1Q9GZK7 315 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 B3GALT5Q9Y2C3 310 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 SLC25A15Q9Y619 301 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 ARFGEF3Q5TH69 2177 aa13.97□□□□□ -0.17
PDGFA-201ENST00000354513 IGHV4-30-2A0A087WSY4 118 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 DUXAA6NLW8 204 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 PDLIM1O00151 329 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 SULT2B1O00204 365 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 AP3D1O14617 1153 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 ITGA5P08648 1049 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 GGT1P19440 569 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 SLC16A1P53985 500 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 SLC25A3Q00325 362 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 CHI3L2Q15782 390 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 FBXW9Q5XUX1 488 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 BHLHB9Q6PI77 547 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 EIF3MQ7L2H7 374 aaKnown RBP13.96□□□□□ -0.17
PDGFA-201ENST00000354513 C16orf62Q7Z3J2 963 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 MTDHQ86UE4 582 aaKnown RBP13.96□□□□□ -0.17
PDGFA-201ENST00000354513 ADGRG3Q86Y34 549 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 SLC25A43Q8WUT9 341 aaPredicted RBP13.96□□□□□ -0.17
PDGFA-201ENST00000354513 TMEM234Q8WY98 164 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 ROPN1LQ96C74 230 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 SORT1Q99523 831 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 INTS9Q9NV88 658 aaKnown RBP13.96□□□□□ -0.17
PDGFA-201ENST00000354513 WDR45Q9Y484 360 aa13.96□□□□□ -0.17
PDGFA-201ENST00000354513 A0A1W2PR80 420 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 GPRIN2O60269 458 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 PMS2P2O95744 297 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 BGNP21810 368 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 CSNK2A1P68400 391 aaPredicted RBP13.95□□□□□ -0.18
PDGFA-201ENST00000354513 MAD2L1Q13257 205 aaPredicted RBP13.95□□□□□ -0.18
PDGFA-201ENST00000354513 SPANXN4Q5MJ08 99 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 CCDC103Q8IW40 242 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 ZNF100Q8IYN0 542 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 OR52N5Q8NH56 324 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 SPATA3Q8NHX4 192 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 DYDC1Q8WWB3 177 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 CNOT9Q92600 299 aaKnown RBP13.95□□□□□ -0.18
PDGFA-201ENST00000354513 NEURL3Q96EH8 262 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 SERINC1Q9NRX5 453 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 MALT1Q9UDY8 824 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 CHRNA9Q9UGM1 479 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 SLC35A3Q9Y2D2 325 aa13.95□□□□□ -0.18
PDGFA-201ENST00000354513 CPSF4O95639 269 aaKnown RBP13.94□□□□□ -0.18
PDGFA-201ENST00000354513 SERPINE1P05121 402 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 IMPDH2P12268 514 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 UQCRC2P22695 453 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 APOBEC1P41238 236 aaKnown RBP13.94□□□□□ -0.18
PDGFA-201ENST00000354513 H3F3AP84243 136 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 CHRNEQ04844 493 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 GABRA6Q16445 453 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 GRINAQ7Z429 371 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 P2RY8Q86VZ1 359 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 WDR31Q8NA23 367 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 OR52E4Q8NGH9 312 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 XAGE5Q8WWM1 108 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 OIT3Q8WWZ8 545 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 TESCQ96BS2 214 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 TEX37Q96LM6 180 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 CACNG6Q9BXT2 260 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 AMBRA1Q9C0C7 1298 aa13.94□□□□□ -0.18
PDGFA-201ENST00000354513 SLC38A1Q9H2H9 487 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms