RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
COPE-202ENST00000349893 ZCCHC3Q9NUD5 404 aaKnown RBP13.66□□□□□ -0.22
COPE-202ENST00000349893 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
COPE-202ENST00000349893 SPEF1Q9Y4P9 236 aa13.66□□□□□ -0.22
COPE-202ENST00000349893 PCDHB14Q9Y5E9 798 aa13.66□□□□□ -0.22
COPE-202ENST00000349893 SERINC4A6NH21 518 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 B4DSR2 109 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 OR4A8P0C604 315 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 SDC1P18827 310 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 PAX7P23759 505 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 C3orf36Q3SXR2 165 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 TIFABQ6ZNK6 161 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 SPATA19Q7Z5L4 167 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 TMCO5AQ8N6Q1 288 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 RFWD2Q8NHY2 731 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 ZNF418Q8TF45 676 aaPredicted RBP13.65□□□□□ -0.22
COPE-202ENST00000349893 TMEM234Q8WY98 164 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 MTERF3Q96E29 417 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 ARL5BQ96KC2 179 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 SLC38A2Q96QD8 506 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 RBM4Q9BWF3 364 aaKnown RBP13.65□□□□□ -0.22
COPE-202ENST00000349893 GPATCH2Q9NW75 528 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 PARPBPQ9NWS1 579 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 C1orf109Q9NX04 203 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 SH3BP4Q9P0V3 963 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 SLC9A8Q9Y2E8 581 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 FLVCR1Q9Y5Y0 555 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 KCNE3Q9Y6H6 103 aa13.65□□□□□ -0.22
COPE-202ENST00000349893 PRKDCP78527 4128 aaKnown RBP13.65□□□□□ -0.22
COPE-202ENST00000349893 SEC22BO75396 215 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 SNRPAP09012 282 aaKnown RBP13.64□□□□□ -0.23
COPE-202ENST00000349893 FKBP2P26885 142 aaKnown RBP13.64□□□□□ -0.23
COPE-202ENST00000349893 APOBEC1P41238 236 aaKnown RBP13.64□□□□□ -0.23
COPE-202ENST00000349893 MAGEA8P43361 318 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
COPE-202ENST00000349893 CCR4P51679 360 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 MERTKQ12866 999 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 TRIP10Q15642 601 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 ZNF141Q15928 474 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 TSPO2Q5TGU0 170 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 C9orf135Q5VTT2 229 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 CASP12Q6UXS9 341 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 PEG10Q86TG7 708 aaKnown RBP13.64□□□□□ -0.23
COPE-202ENST00000349893 GLCCI1Q86VQ1 547 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 CCDC103Q8IW40 242 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 FAM71CQ8NEG0 241 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 KCNF1Q9H3M0 494 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 TNFRSF12AQ9NP84 129 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 CRNNQ9UBG3 495 aaPredicted RBP13.64□□□□□ -0.23
COPE-202ENST00000349893 UPB1Q9UBR1 384 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 KCNE5Q9UJ90 142 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 TRAPPC4Q9Y296 219 aa13.64□□□□□ -0.23
COPE-202ENST00000349893 SPIN1Q9Y657 262 aaPredicted RBP13.64□□□□□ -0.23
COPE-202ENST00000349893 TRIM77I1YAP6 450 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 TMPRSS2O15393 492 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 AKAP10O43572 662 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 CRYAAP02489 173 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 KRT16P08779 473 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 IGFBP1P08833 259 aaPredicted RBP13.63□□□□□ -0.23
COPE-202ENST00000349893 ASMTP46597 345 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 LIMS1P48059 325 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 NAA20P61599 178 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 PDZK1Q5T2W1 519 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 AP1ARQ63HQ0 302 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 KLHL24Q6TFL4 600 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 RNF165Q6ZSG1 346 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 ZNF614Q8N883 585 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 NUP37Q8NFH4 326 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 ADAMTS15Q8TE58 950 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 TMEM45BQ96B21 275 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 CHMP6Q96FZ7 201 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 DOK1Q99704 481 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 CDC42EP4Q9H3Q1 356 aaKnown RBP13.63□□□□□ -0.23
COPE-202ENST00000349893 ZNF442Q9H7R0 627 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 PCDHB10Q9UN67 800 aa13.63□□□□□ -0.23
COPE-202ENST00000349893 A0A0G2JK05 382 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 IGLV1-44P01699 117 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 ERCC1P07992 297 aaPredicted RBP13.62□□□□□ -0.23
COPE-202ENST00000349893 EFNA1P20827 205 aaPredicted RBP13.62□□□□□ -0.23
COPE-202ENST00000349893 NAAAQ02083 359 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 POU3F1Q03052 451 aaPredicted RBP13.62□□□□□ -0.23
COPE-202ENST00000349893 SLC17A1Q14916 467 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 HIKESHIQ53FT3 197 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 AWAT1Q58HT5 328 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 FRMD7Q6ZUT3 714 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 FAM169BQ8N8A8 192 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 OR4F15Q8NGB8 312 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 OR56A1Q8NGH5 318 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 WDR60Q8WVS4 1066 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 TMEM186Q96B77 213 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 TSSK3Q96PN8 268 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 ZNF317Q96PQ6 595 aaPredicted RBP13.62□□□□□ -0.23
COPE-202ENST00000349893 SDF2Q99470 211 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 RACGAP1Q9H0H5 632 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 CTPS2Q9NRF8 586 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 ATP6V1HQ9UI12 483 aa13.62□□□□□ -0.23
COPE-202ENST00000349893 FAF1Q9UNN5 650 aaPredicted RBP13.62□□□□□ -0.23
COPE-202ENST00000349893 CENPVL1A0A0U1RR11 272 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms