RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 KMT2BQ9UMN6 2715 aaPredicted RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 CEP295Q9C0D2 2601 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 A0A087WXM4 84 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 ELOA3DA6NLF2 546 aaPredicted RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 ENO4A6NNW6 628 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 EFCAB9A8MZ26 197 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 KPNA4O00629 521 aaPredicted RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 GNB5O14775 395 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 MPZL2O60487 215 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 NPIPB7O75200 414 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 RCBTB2O95199 551 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 ADRB1P08588 477 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 LIPCP11150 499 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 FUT1P19526 365 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 FMO3P31513 532 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SMSP52788 366 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 LTBQ06643 244 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 CRYZQ08257 329 aaKnown RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 INPP5JQ15735 1006 aaPredicted RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 SMN1Q16637 294 aaKnown RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 ELOA3BQ3SY89 546 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 ZBED5Q49AG3 693 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 ACER2Q5QJU3 275 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 DCAF10Q5QP82 559 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 TMEM201Q5SNT2 666 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SLC22A10Q63ZE4 541 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 OR5M10Q6IEU7 315 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SLC30A6Q6NXT4 461 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SLC27A4Q6P1M0 643 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SLC46A3Q7Z3Q1 461 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 FAM26EQ8N5C1 309 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 TMEM156Q8N614 296 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 IQCF1Q8N6M8 205 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 FADS6Q8N9I5 356 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 WDSUB1Q8N9V3 476 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 BPIFB6Q8NFQ5 453 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 ELOA3Q8NG57 546 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 ST8SIA1Q92185 356 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SGCDQ92629 289 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SGTBQ96EQ0 304 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 SAMD8Q96LT4 415 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 TNFRSF13CQ96RJ3 184 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 POLDIP3Q9BY77 421 aaKnown RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 ADNPQ9H2P0 1102 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 OR52D1Q9H346 318 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 UBQLN3Q9H347 655 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 METTL7AQ9H8H3 244 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 GPN2Q9H9Y4 310 aaPredicted RBP9.98□□□□□ -0.81
ECM1-201ENST00000346569 HHATLQ9HCP6 504 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 KLRF1Q9NZS2 232 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 WIF1Q9Y5W5 379 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 CDH10Q9Y6N8 788 aa9.98□□□□□ -0.81
ECM1-201ENST00000346569 TPRP12270 2363 aaKnown RBP9.97□□□□□ -0.81
ECM1-201ENST00000346569 SH3D21A4FU49 640 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 DPPA5A6NC42 116 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 XPNPEP2O43895 674 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 SMNDC1O75940 238 aaKnown RBP eCLIP9.97□□□□□ -0.81
ECM1-201ENST00000346569 OR7A10O76100 309 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 CLPTM1O96005 669 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 TSPAN19P0C672 248 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 CCL3P10147 92 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 LIFP15018 202 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 PRKCAP17252 672 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 CXCR1P25024 350 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 HTR3AP46098 478 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 RPL5P46777 297 aaKnown RBP9.97□□□□□ -0.81
ECM1-201ENST00000346569 SLC9A3P48764 834 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 POLR2HP52434 150 aaKnown RBP9.97□□□□□ -0.81
ECM1-201ENST00000346569 SOX8P57073 446 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 GABARAPL2P60520 117 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 SLC35A2P78381 396 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 AIMP2Q13155 320 aaKnown RBP9.97□□□□□ -0.81
ECM1-201ENST00000346569 OCLNQ16625 522 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 THSD4Q6ZMP0 1018 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 PTCHD4Q6ZW05 846 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 GRINAQ7Z429 371 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 ZNF227Q86WZ6 799 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 SIRT6Q8N6T7 355 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 OR2M3Q8NG83 312 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 OR8J1Q8NGP2 316 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 OR4Q3Q8NH05 313 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 TEX47Q8TBZ9 253 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 TMEM234Q8WY98 164 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 THOC3Q96J01 351 aaKnown RBP9.97□□□□□ -0.81
ECM1-201ENST00000346569 SIGLEC11Q96RL6 698 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 NPAS1Q99742 590 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 FKBP14Q9NWM8 211 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 PAK1IP1Q9NWT1 392 aaPredicted RBP9.97□□□□□ -0.81
ECM1-201ENST00000346569 HPF1Q9NWY4 346 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 IMPAD1Q9NX62 359 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 TVP23BQ9NYZ1 205 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 TPRKBQ9Y3C4 175 aa9.97□□□□□ -0.81
ECM1-201ENST00000346569 TMED7-TICAM2A0A0A6YYA0 188 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 TRABD2BA6NFA1 517 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 LRRN3E7EW58 273 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 M0R129 80 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 BHLHE40O14503 412 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 EFNA2O43921 213 aa9.96□□□□□ -0.82
ECM1-201ENST00000346569 PRKYO43930 277 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms