RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 ATG16L1Q676U5 607 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 OLIG3Q7RTU3 272 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 RNF130Q86XS8 419 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 ZNF100Q8IYN0 542 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 ZG16BQ96DA0 208 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 TEX37Q96LM6 180 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 SMR3AQ99954 134 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 CTPS2Q9NRF8 586 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 AGAP5A6NIR3 686 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 H7C1Q1 480 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 FAAHO00519 579 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 SNNO75324 88 aaPredicted RBP16.04■□□□□ 0.16
RAB28-202ENST00000330852 KRT75O95678 551 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 COX5AP20674 150 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 WDR4P57081 412 aaKnown RBP16.04■□□□□ 0.16
RAB28-202ENST00000330852 CAPRIN1Q14444 709 aaKnown RBP16.04■□□□□ 0.16
RAB28-202ENST00000330852 TIMM23BQ5SRD1 257 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 ABLIM2Q6H8Q1 611 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 ZNF621Q6ZSS3 439 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 ANKRD42Q8N9B4 389 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 PIGXQ8TBF5 258 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 FBXW5Q969U6 566 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 MUCL1Q96DR8 90 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 SLC38A1Q9H2H9 487 aa16.04■□□□□ 0.16
RAB28-202ENST00000330852 TMEM120BA0PK00 339 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 PRAMEF27A3QJZ7 478 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 PGM3O95394 542 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 IL6P05231 212 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 IDO1P14902 403 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 UQCRBP14927 111 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 RYKP34925 604 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 SLC16A1P53985 500 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 RPS4XP62701 263 aaKnown RBP16.03■□□□□ 0.16
RAB28-202ENST00000330852 TSC22D1Q15714 1073 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 ETFDHQ16134 617 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 ADGRG3Q86Y34 549 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 ZNF300Q96RE9 604 aaPredicted RBP16.03■□□□□ 0.16
RAB28-202ENST00000330852 PRSS50Q9UI38 385 aa16.03■□□□□ 0.16
RAB28-202ENST00000330852 ZNF208O43345 1280 aa16.02■□□□□ 0.16
RAB28-202ENST00000330852 EPHA3P29320 983 aa16.02■□□□□ 0.16
RAB28-202ENST00000330852 FBXW9Q5XUX1 488 aa16.02■□□□□ 0.16
RAB28-202ENST00000330852 ALKBH2Q6NS38 261 aa16.02■□□□□ 0.16
RAB28-202ENST00000330852 ZNF771Q7L3S4 317 aaPredicted RBP16.02■□□□□ 0.16
RAB28-202ENST00000330852 ZNF440Q8IYI8 595 aa16.02■□□□□ 0.16
RAB28-202ENST00000330852 TRMT61AQ96FX7 289 aaKnown RBP16.02■□□□□ 0.16
RAB28-202ENST00000330852 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.02■□□□□ 0.16
RAB28-202ENST00000330852 TMEM181Q9P2C4 612 aa16.02■□□□□ 0.16
RAB28-202ENST00000330852 ABCA2Q9BZC7 2435 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 EIF1BO60739 113 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 LY6G6DO95868 133 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 DBIP07108 87 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 NR2F1P10589 423 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 IL7RP16871 459 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 GGT1P19440 569 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 RPS4Y1P22090 263 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 IL12AP29459 219 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 IDH2P48735 452 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 POLR2HP52434 150 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 ATP5J2P56134 94 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 NME5P56597 212 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 PPA1Q15181 289 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 SYPL1Q16563 259 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 ZSWIM7Q19AV6 140 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 PDCD4Q53EL6 469 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 SEZ6L2Q6UXD5 910 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 ANKFN1Q8N957 763 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 LILRB1Q8NHL6 650 aaPredicted RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 WDR60Q8WVS4 1066 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 CNOT9Q92600 299 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 DDIT4LQ96D03 193 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 MAELQ96JY0 434 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 INPP5KQ9BT40 448 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 WDR55Q9H6Y2 383 aaPredicted RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 NKIRAS1Q9NYS0 192 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 CALML5Q9NZT1 146 aa16.02■□□□□ 0.15
RAB28-202ENST00000330852 NOSIPQ9Y314 301 aaKnown RBP16.02■□□□□ 0.15
RAB28-202ENST00000330852 HEATR1Q9H583 2144 aaKnown RBP16.01■□□□□ 0.15
RAB28-202ENST00000330852 ZNF716A6NP11 495 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 C9JVG2 144 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 OVOL3O00110 214 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 RFXANKO14593 260 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 CLOCKO15516 846 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 BCAS1O75363 584 aaPredicted RBP16.01■□□□□ 0.15
RAB28-202ENST00000330852 LYZL6O75951 148 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 ZCCHC18P0CG32 403 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 IGHV1-2P23083 117 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 SLC1A3P43003 542 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 H3F3AP84243 136 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 GSTA3Q16772 222 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 ZNF672Q499Z4 452 aaPredicted RBP16.01■□□□□ 0.15
RAB28-202ENST00000330852 C1QTNF12Q5T7M4 302 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 MSANTD1Q6ZTZ1 278 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 PEX5LQ8IYB4 626 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 CIARTQ8N365 385 aaPredicted RBP16.01■□□□□ 0.15
RAB28-202ENST00000330852 ZNF433Q8N7K0 673 aaPredicted RBP16.01■□□□□ 0.15
RAB28-202ENST00000330852 APH1AQ96BI3 265 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 ZNF775Q96BV0 537 aaPredicted RBP16.01■□□□□ 0.15
RAB28-202ENST00000330852 RADILQ96JH8 1075 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 ARL5BQ96KC2 179 aa16.01■□□□□ 0.15
RAB28-202ENST00000330852 GRIP2Q9C0E4 1043 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms