RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TMEM178AQ8NBL3 297 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 PFN4Q8NHR9 129 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 SNRNP27Q8WVK2 155 aaKnown RBP9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 GTPBP3Q969Y2 492 aaKnown RBP9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 GNRHR2Q96P88 292 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 MBOAT4Q96T53 435 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 MEPEQ9NQ76 525 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 KLHL1Q9NR64 748 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 TMED7Q9Y3B3 224 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 CHD8Q9HCK8 2581 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 PTPRQQ9UMZ3 2332 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 HTR3EA5X5Y0 456 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEM8BA6NDV4 472 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 KPNA4O00629 521 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 KLF4O43474 513 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 MITFO75030 526 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 CDH2P19022 906 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 HK1P19367 917 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 FPR3P25089 353 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 SRD5A2P31213 254 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 APOBEC1P41238 236 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 EIF1P41567 113 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GSSP48637 474 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ADGRG3Q86Y34 549 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 PARP8Q8N3A8 854 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 POC1BQ8TC44 478 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 FAM46AQ96IP4 442 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GABARAPL3Q9BY60 117 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 UCK2Q9BZX2 261 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 B4GALT7Q9UBV7 327 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ZFHX4Q86UP3 3567 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ENO4A6NNW6 628 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 KLRC4-KLRK1H3BQV0 150 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 TAF4O00268 1085 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 SUSD5O60279 629 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 WISP1O95388 367 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 SNAP29O95721 258 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 IFI30P13284 250 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF17P17021 662 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GSTM3P21266 225 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ADH6P28332 368 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GPR4P46093 362 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 MEOX1P50221 254 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 TSPAN31Q12999 210 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 TBR1Q16650 682 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEM44Q2T9K0 475 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GLYR1Q49A26 553 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 KLHL17Q6TDP4 642 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GALNTL5Q7Z4T8 443 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GALNT5Q7Z7M9 940 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 GTPBP8Q8N3Z3 284 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ZADH2Q8N4Q0 377 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 NPAS1Q99742 590 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 UBQLN3Q9H347 655 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 TOR3AQ9H497 397 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF703Q9H7S9 590 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 C20orf141Q9NUB4 165 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 ENOPH1Q9UHY7 261 aa9.28□□□□□ -0.92
VIPAS39-201ENST00000327028 TRAV17A0A0B4J275 112 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 TMEM72A0PK05 275 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 MKRN2OSH3BPM6 223 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 POU2F1P14859 743 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 ELK4P28324 431 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 MAP2K6P52564 334 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 CRYZQ08257 329 aaKnown RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 COX10Q12887 443 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 NHSL2Q5HYW2 709 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 POMZP3Q6PJE2 187 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 C5orf46Q6UWT4 87 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 TMPRSS11FQ6ZWK6 438 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 LSRQ86X29 649 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 P3H2Q8IVL5 708 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 CDK20Q8IZL9 346 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 STK35Q8TDR2 534 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 BPIFA2Q96DR5 249 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 GPA33Q99795 319 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 ADI1Q9BV57 179 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 OR2B2Q9GZK3 357 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 CHRNA9Q9UGM1 479 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 RAB26Q9ULW5 256 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 MRPS18CQ9Y3D5 142 aaKnown RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 CSAG2Q9Y5P2 127 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 MPDZO75970 2070 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 CELSR3Q9NYQ7 3312 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 TNRC6AQ8NDV7 1962 aaKnown RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 NCKAP5O14513 1909 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 A8MVM7 634 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF208O43345 1280 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 ZIC3O60481 467 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 GLSO94925 669 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 ITGB2P05107 769 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 RFPL3SP0C7P2 107 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 MAKP20794 623 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 IL1RL1Q01638 556 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 EGR4Q05215 589 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 HYAL4Q2M3T9 481 aa9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 ZIK1Q3SY52 487 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-201ENST00000327028 MEX3DQ86XN8 651 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms