RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 RFKQ969G6 155 aa11.61□□□□□ -0.55
PTPN6-201ENST00000318974 WDR77Q9BQA1 342 aaPredicted RBP11.61□□□□□ -0.55
PTPN6-201ENST00000318974 MESP1Q9BRJ9 268 aa11.61□□□□□ -0.55
PTPN6-201ENST00000318974 SEMA4CQ9C0C4 833 aa11.61□□□□□ -0.55
PTPN6-201ENST00000318974 WWTR1Q9GZV5 400 aa11.61□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF229Q9UJW7 825 aa11.61□□□□□ -0.55
PTPN6-201ENST00000318974 MRTO4Q9UKD2 239 aaKnown RBP11.61□□□□□ -0.55
PTPN6-201ENST00000318974 PPIEQ9UNP9 301 aaKnown RBP11.61□□□□□ -0.55
PTPN6-201ENST00000318974 EXOSC1Q9Y3B2 195 aaKnown RBP11.61□□□□□ -0.55
PTPN6-201ENST00000318974 ASCC3Q8N3C0 2202 aaKnown RBP11.61□□□□□ -0.55
PTPN6-201ENST00000318974 VPS13AQ96RL7 3174 aa11.61□□□□□ -0.55
PTPN6-201ENST00000318974 A0A1W2PNU3 283 aaPredicted RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 C9orf172C9J069 976 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 LOC110117498-PIK3R3F6TDL0 507 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 KLF4O43474 513 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 PRKNO60260 465 aaPredicted RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 ATP6V1G1O75348 118 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 IL33O95760 270 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 PTTG1O95997 202 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 FTH1P19P0C7X4 201 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 ETV1P50549 477 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 RORCP51449 518 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 ATP12AP54707 1039 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF141Q15928 474 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 MRPL2Q5T653 305 aaKnown RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 PAQR6Q6TCH4 344 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 NKAIN4Q8IVV8 208 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 CLDN22Q8N7P3 220 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 C8orf44Q96CB5 159 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 RNFT2Q96EX2 444 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 QPCTLQ9NXS2 382 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 PCDHGB6Q9Y5F9 930 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 FER1L5A0AVI2 2057 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 SPAARA0A1B0GVQ0 90 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 PROB1E7EW31 1015 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 NPIPB9F8W1W9 429 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 KLF7O75840 302 aaPredicted RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 RPS19P39019 145 aaKnown RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 NR0B1P51843 470 aaKnown RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 COPZ1P61923 177 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 LIPKQ5VXJ0 399 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 TIPARPQ7Z3E1 657 aaKnown RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 RANBP3LQ86VV4 465 aaPredicted RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 CADM3Q8N126 398 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF614Q8N883 585 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 APCDD1LQ8NCL9 501 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 C17orf47Q8NEP4 570 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 OR2Y1Q8NGV0 311 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
PTPN6-201ENST00000318974 CEP19Q96LK0 163 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 SLC30A2Q9BRI3 323 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 CCDC32Q9BV29 185 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 SPRY4Q9C004 299 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 EVA1AQ9H8M9 152 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 POLE4Q9NR33 117 aa11.6□□□□□ -0.55
PTPN6-201ENST00000318974 LOC102723996A0A087X1L8 192 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 TO15178 435 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 SURF4O15260 269 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 THY1P04216 161 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 UMODP07911 640 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 FOLR3P41439 243 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 SLC26A5P58743 744 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 RNF4P78317 190 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 HOXC5Q00444 222 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 ZSWIM7Q19AV6 140 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 FAM69BQ5VUD6 431 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 HSDL2Q6YN16 418 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF620Q6ZNG0 422 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 POC5Q8NA72 575 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 POGLUT1Q8NBL1 392 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 LMF1Q96S06 567 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 NRSN2Q9GZP1 204 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 HOXD1Q9GZZ0 328 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 SMURF1Q9HCE7 757 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF223Q9UK11 482 aaPredicted RBP11.59□□□□□ -0.55
PTPN6-201ENST00000318974 GPR52Q9Y2T5 361 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 CDH10Q9Y6N8 788 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 IQCMA0A1B0GVH7 501 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 CDC14CA4D256 554 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 IL1AP01583 271 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 TSPAN19P0C672 248 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 CSRP1P21291 193 aaKnown RBP11.59□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF136P52737 540 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 RUNX1T1Q06455 604 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 TPBGQ13641 420 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 FGFBP1Q14512 234 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 PGGHGQ32M88 737 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 CLEC12AQ5QGZ9 265 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 ZNF441Q8N8Z8 693 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 TMEM255BQ8WV15 326 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 TP53INP1Q96A56 240 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 TRMT61AQ96FX7 289 aaKnown RBP11.59□□□□□ -0.55
PTPN6-201ENST00000318974 KCNS3Q9BQ31 491 aa11.59□□□□□ -0.55
PTPN6-201ENST00000318974 FOXJ2Q9P0K8 574 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms