RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 SELENOVP59797 346 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 SPOCK1Q08629 439 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 KDM4DQ6B0I6 523 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 TRNP1Q6NT89 227 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 IL17RCQ8NAC3 791 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 OR6F1Q8NGZ6 308 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 LMF2Q9BU23 707 aaKnown RBP16.22■□□□□ 0.19
SYNPO-201ENST00000307662 ACSS1Q9NUB1 689 aaPredicted RBP16.22■□□□□ 0.19
SYNPO-201ENST00000307662 SLC35A3Q9Y2D2 325 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 SLC9B1P1A6NJY1 282 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 CD300LBA8K4G0 201 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 BTG1P62324 171 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 GAB1Q13480 694 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 RNF141Q8WVD5 230 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 CAMK2AQ9UQM7 478 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 POLHQ9Y253 713 aa16.22■□□□□ 0.19
SYNPO-201ENST00000307662 K7EPK0 472 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 CPNE6O95741 557 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 SERPINA7P05543 415 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 TACR1P25103 407 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 RAB31Q13636 194 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 ARHGAP19Q14CB8 494 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 MLC1Q15049 377 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 SLC9A3R2Q15599 337 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 TBPL2Q6SJ96 375 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 FAM71E2Q8N5Q1 922 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 SCARB1Q8WTV0 552 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 TSACCQ96A04 125 aaPredicted RBP16.21■□□□□ 0.19
SYNPO-201ENST00000307662 HCAR1Q9BXC0 346 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 ALOXE3Q9BYJ1 711 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 C20orf85Q9H1P6 137 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 RLIMQ9NVW2 624 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 CLEC2LP0C7M8 214 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 OPRD1P41143 372 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 Q6ZSR9 355 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 TRAPPC6BQ86SZ2 158 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 OR51Q1Q8NH59 317 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 ABHD4Q8TB40 342 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 UQCC2Q9BRT2 126 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 HINT2Q9BX68 163 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 INIPQ9NRY2 104 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 FAM212BQ9NTI7 297 aaPredicted RBP16.21■□□□□ 0.19
SYNPO-201ENST00000307662 KCMF1Q9P0J7 381 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 TRDV1A0A1B0GX56 115 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 MYADML2A6NDP7 307 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 FTCDNL1E5RQL4 147 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 SURF4O15260 269 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 SLC14A1Q13336 389 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 GPR18Q14330 331 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 HIST2H3PS2Q5TEC6 136 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 B3GLCTQ6Y288 498 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 TTC9BQ8N6N2 239 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 BBS1Q8NFJ9 593 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 OR52I1Q8NGK6 324 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 SENP5Q96HI0 755 aaPredicted RBP16.21■□□□□ 0.19
SYNPO-201ENST00000307662 BTBD2Q9BX70 525 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 SAMD10Q9BYL1 202 aa16.21■□□□□ 0.19
SYNPO-201ENST00000307662 I6L893 689 aaPredicted RBP16.21■□□□□ 0.18
SYNPO-201ENST00000307662 IDUAP35475 653 aa16.21■□□□□ 0.18
SYNPO-201ENST00000307662 PDE7AQ13946 482 aa16.21■□□□□ 0.18
SYNPO-201ENST00000307662 CST6Q15828 149 aa16.21■□□□□ 0.18
SYNPO-201ENST00000307662 PRAMEF8Q5VWM4 474 aa16.21■□□□□ 0.18
SYNPO-201ENST00000307662 PRAMEF7Q5VXH5 474 aa16.21■□□□□ 0.18
SYNPO-201ENST00000307662 PAPD4Q6PIY7 484 aaKnown RBP16.21■□□□□ 0.18
SYNPO-201ENST00000307662 FAM122BQ7Z309 247 aa16.21■□□□□ 0.18
SYNPO-201ENST00000307662 ASB17Q8WXJ9 295 aa16.21■□□□□ 0.18
SYNPO-201ENST00000307662 SHOXO15266 292 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 EDN1P05305 212 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 CR2P20023 1033 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 GPLD1P80108 840 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 SERTAD2Q14140 314 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 FAM69BQ5VUD6 431 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 HSD11B1LQ7Z5J1 315 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 RNF113BQ8IZP6 322 aaKnown RBP16.2■□□□□ 0.18
SYNPO-201ENST00000307662 TM9SF4Q92544 642 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 TBC1D20Q96BZ9 403 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 OCEL1Q9H607 264 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 FBRSQ9HAH7 460 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 MYH1P12882 1939 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 OR2T1O43869 369 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 GABRR1P24046 479 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 ACTBL2Q562R1 376 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 NXNL2Q5VZ03 156 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 GHSRQ92847 366 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 FBXO8Q9NRD0 319 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 CPNE7Q9UBL6 633 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 SMAD6O43541 496 aaKnown RBP16.2■□□□□ 0.18
SYNPO-201ENST00000307662 C1orf61Q13536 156 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 NSDHLQ15738 373 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 KCNIP4Q6PIL6 250 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 GPR155Q7Z3F1 870 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 TMEM25Q86YD3 366 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 ZNF480Q8WV37 535 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 MR1Q95460 341 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 MIB2Q96AX9 1013 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 EHFQ9NZC4 300 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 SLC6A14Q9UN76 642 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 ADAM18Q9Y3Q7 739 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 ACOD1A6NK06 481 aa16.2■□□□□ 0.18
SYNPO-201ENST00000307662 PTGER1P34995 402 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms