RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TPD52P55327 224 aaPredicted RBP22.04■■□□□ 1.12
HOXC9-201ENST00000303450 FLOT2Q14254 428 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 ELOA3BQ3SY89 546 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 CHMP1BQ7LBR1 199 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 YTHDF3Q7Z739 585 aaKnown RBP22.04■■□□□ 1.12
HOXC9-201ENST00000303450 ATG4DQ86TL0 474 aaPredicted RBP22.04■■□□□ 1.12
HOXC9-201ENST00000303450 GGNQ86UU5 652 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 ELOA3Q8NG57 546 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 SLC47A1Q96FL8 570 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 KLHL15Q96M94 604 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 AMBRA1Q9C0C7 1298 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 C12orf10Q9HB07 376 aa22.04■■□□□ 1.12
HOXC9-201ENST00000303450 TMEM72A0PK05 275 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 TRAPPC13A5PLN9 417 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 PYCARD-AS1I3L0S3 204 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 STSP08842 583 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 TFPIP10646 304 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 PNMTP11086 282 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 SHC1P29353 583 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 CDH12P55289 794 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 CLDN15P56746 228 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 TAS2R41P59536 307 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 RPS3AP61247 264 aaKnown RBP22.03■■□□□ 1.12
HOXC9-201ENST00000303450 SF3B4Q15427 424 aaKnown RBP eCLIP22.03■■□□□ 1.127e-7■□□□□ 10.5
HOXC9-201ENST00000303450 SYT14P1Q58G82 188 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 ESPNLQ6ZVH7 1005 aa22.03■■□□□ 1.12
HOXC9-201ENST00000303450 PHF10Q8WUB8 498 aaKnown RBP22.03■■□□□ 1.12
HOXC9-201ENST00000303450 POLR2J2Q9GZM3 115 aaKnown RBP22.03■■□□□ 1.12
HOXC9-201ENST00000303450 POLR2J3Q9H1A7 115 aaKnown RBP22.03■■□□□ 1.12
HOXC9-201ENST00000303450 ZNF208O43345 1280 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 ACVR2AP27037 513 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 IFNA8P32881 189 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 PTGER4P35408 488 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 CA7P43166 264 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 PDSS1Q5T2R2 415 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 SWT1Q5T5J6 900 aaKnown RBP22.02■■□□□ 1.12
HOXC9-201ENST00000303450 C1QL3Q5VWW1 255 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 C3P1Q6ZMU1 363 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 POP5Q969H6 163 aaKnown RBP22.02■■□□□ 1.12
HOXC9-201ENST00000303450 DDIT4LQ96D03 193 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 OR5B2Q96R09 309 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 TUBA1CQ9BQE3 449 aa22.02■■□□□ 1.12
HOXC9-201ENST00000303450 A0A0J9YW62 118 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 TCRBV5S2A0A599 114 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 TNFSF11O14788 317 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 ADAMDEC1O15204 470 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 HOXD4P09016 255 aaPredicted RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 YAP1P46937 504 aaKnown RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 EIF1AXP47813 144 aaKnown RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 PIN1Q13526 163 aaPredicted RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 SGCBQ16585 318 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 HBMQ6B0K9 141 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 TSPYL5Q86VY4 417 aaPredicted RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 OR2V1Q8NHB1 315 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 ZPLD1Q8TCW7 415 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 SLC38A4Q969I6 547 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 OR11A1Q9GZK7 315 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 CHP2O43745 196 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 SEMA7AO75326 666 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 OR5F1O95221 314 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 CLK1P49759 484 aaKnown RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 CTU2Q2VPK5 515 aaKnown RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 CYP4Z1Q86W10 505 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 OR10D3Q8NH80 312 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 SLC41A3Q96GZ6 507 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 ADGRG7Q96K78 797 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 PRRC1Q96M27 445 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 SEPHS2Q99611 448 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 SLC7A7Q9UM01 511 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 FAM32AQ9Y421 112 aaKnown RBP22.01■■□□□ 1.11
HOXC9-201ENST00000303450 ENPP4Q9Y6X5 453 aa22.01■■□□□ 1.11
HOXC9-201ENST00000303450 A0A1W2PNR3 127 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 AQP12BA6NM10 295 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 A8MVM7 634 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 J3QKU1 62 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 CARD18P57730 90 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 ZSCAN26Q16670 478 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 ACSF3Q4G176 576 aaPredicted RBP22■■□□□ 1.11
HOXC9-201ENST00000303450 C1orf185Q5T7R7 199 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 GDF7Q7Z4P5 450 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 AQP12AQ8IXF9 295 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 C7orf34Q96L11 122 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 TRIB1Q96RU8 372 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 TIGARQ9NQ88 270 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 PAQR5Q9NXK6 330 aaPredicted RBP22■■□□□ 1.11
HOXC9-201ENST00000303450 RIMS3Q9UJD0 308 aa22■■□□□ 1.11
HOXC9-201ENST00000303450 MPDZO75970 2070 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 A0A087WUJ7 227 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 CLCA1A8K7I4 914 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 hCG_2039718K7EN88 272 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 CIB2O75838 187 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 THY1P04216 161 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 SEMG1P04279 462 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 ITGA2P17301 1181 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 VLDLRP98155 873 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 B3GNT6Q6ZMB0 384 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 SPATA24Q86W54 205 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 LSRQ86X29 649 aaPredicted RBP21.99■■□□□ 1.11
HOXC9-201ENST00000303450 OSTF1Q92882 214 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 ZNF845Q96IR2 970 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms