RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CLDN17P56750 224 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ASRGL1Q7L266 308 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 RPP25Q9BUL9 199 aaKnown RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 SMCO3A2RU48 225 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 GNAO1P09471 354 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 MAN2A2P49641 1150 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 PAPD5Q8NDF8 572 aaKnown RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 OR1J2Q8NGS2 313 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ISOC1Q96CN7 298 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC41A2Q96JW4 573 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 VN1R3Q9BXE9 311 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 RABL2AQ9UBK7 228 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 HHLA2Q9UM44 414 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 RABL2BQ9UNT1 228 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC17A4Q9Y2C5 497 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 LILRA5A6NI73 299 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 EEF1E1-BLOC1S5C9J1V9 151 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 EEF1E1O43324 174 aaKnown RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 POU2F2P09086 479 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 MPLP40238 635 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF322Q6U7Q0 402 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF517Q6ZMY9 492 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 AKAP1Q92667 903 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC25A44Q96H78 314 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 STACQ99469 402 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
CDC42EP3-201ENST00000295324 ATG12O94817 140 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 ITGB2P05107 769 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 RAC2P15153 192 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 SMAD2Q15796 467 aaKnown RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 MEX3DQ86XN8 651 aaKnown RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 ASB17Q8WXJ9 295 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC6A7Q99884 636 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 ANKRD12Q6UB98 2062 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 F13BP05160 661 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC2A5P22732 501 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 STOMP27105 288 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 SIRPAP78324 504 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 USF2Q15853 346 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 RNASE10Q5GAN6 216 aaKnown RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 NIPAL3Q6P499 406 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 NECAB3Q96P71 396 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLAMF8Q9P0V8 285 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 TMEM184BQ9Y519 407 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 CCDC187A0A096LP49 1063 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 TRBV5-4A0A0C4DH59 114 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 DSCR3O14972 297 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 SDHBP21912 280 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 VASNQ6EMK4 673 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 OR5W2Q8NH69 310 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 NPRL2Q8WTW4 380 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 PLA2G2FQ9BZM2 168 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 INPP5EQ9NRR6 644 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 ANKRD10Q9NXR5 420 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 YES1P07947 543 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 OR5D14Q8NGL3 314 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 IGHV3-20A0A0C4DH32 117 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 M0R129 80 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 EIF4E2O60573 245 aaKnown RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 CDK4P11802 303 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 NPR2P20594 1047 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 FKBP2P26885 142 aaKnown RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 PLAG1Q6DJT9 500 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 TMEM207Q6UWW9 146 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF709Q8N972 641 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC25A43Q8WUT9 341 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 A4GALTQ9NPC4 353 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 ASIC5Q9NY37 505 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 NPFFR2Q9Y5X5 522 aa16.44■□□□□ 0.22
CDC42EP3-201ENST00000295324 KDM4EB2RXH2 506 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 PCDH17O14917 1159 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 CDK5R2Q13319 367 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 C1orf210Q8IVY1 113 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF775Q96BV0 537 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 TREM1Q9NP99 234 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 TAS2R8Q9NYW2 309 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 H7C417 338 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 B3GALT4O96024 378 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 ACTBP60709 375 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 ACTG1P63261 375 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 HBMQ6B0K9 141 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 MEPCEQ7L2J0 689 aaKnown RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC37A3Q8NCC5 494 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 DDX31Q9H8H2 851 aaKnown RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 LIN28AQ9H9Z2 209 aaKnown RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 OBP2BQ9NPH6 170 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 DUSP22Q9NRW4 184 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC23A2Q9UGH3 650 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 FXYD6-FXYD2A0A087WZ82 144 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 MKRN2OSH3BPM6 223 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 PET100P0DJ07 73 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 FOXC1Q12948 553 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 SYCE2Q6PIF2 218 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 GDPGP1Q6ZNW5 385 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 SGPP1Q9BX95 441 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 FXYD6Q9H0Q3 95 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 MICAL3Q7RTP6 2002 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 GIPRP48546 466 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC26A5P58743 744 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms