RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 PCDHGA2Q9Y5H1 932 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LRRK1Q38SD2 2015 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FANCMQ8IYD8 2048 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ATP12AP54707 1039 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CDH11P55287 796 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZER1Q7Z7L7 766 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SDR9C7Q8NEX9 313 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR5M1Q8NGP8 315 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR6C2Q9NZP2 312 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NFKBIL1Q9UBC1 381 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF639Q9UID6 485 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MAPRE3Q9UPY8 281 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF175Q9Y473 711 aa13.1□□□□□ -0.31
TNFRSF11A-201ENST00000269485 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PRAMEF26H0Y7S4 382 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CLDN4O14493 209 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SOCS6O14544 535 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 EIF1AYO14602 144 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CLEC3AO75596 197 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DNASE1P24855 282 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ANXA11P50995 505 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ITGA1P56199 1179 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ERVK-25P63136 954 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NCF4Q15080 339 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C10orf62Q5T681 223 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZBTB37Q5TC79 503 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 RPTNQ6XPR3 784 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 KLBQ86Z14 1044 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 PIGXQ8TBF5 258 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FCGR1BQ92637 280 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TSSK2Q96PF2 358 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GPA33Q99795 319 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LRRC61Q9BV99 259 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FTSJ1Q9UET6 329 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ING1Q9UK53 422 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 IKZF2Q9UKS7 526 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MMP17Q9ULZ9 603 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DIMT1Q9UNQ2 313 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 IGHV5-51A0A0C4DH38 117 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 H3BML4 177 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MAN2B1O00754 1011 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 MAGEB1P43366 347 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SOX2P48431 317 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FNTBP49356 437 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 FADDQ13158 208 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TSPYL5Q86VY4 417 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 CALHM3Q86XJ0 350 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TIMM29Q9BSF4 260 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 SPATA5L1Q9BVQ7 753 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 POFUT2Q9Y2G5 429 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ATRXP46100 2492 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 A0A075B6Q4 140 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 C1QBP02746 253 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 BIKQ13323 160 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 EXOSC2Q13868 293 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 GRK1Q15835 563 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 KDM4DQ6B0I6 523 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LINC00299Q6ZSB3 139 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 ZNF321PQ8N8H1 164 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 OR52L1Q8NGH7 329 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 NUDT22Q9BRQ3 303 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 DUSP21Q9H596 190 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 LIN7BQ9HAP6 207 aa13.09□□□□□ -0.31
TNFRSF11A-201ENST00000269485 A0A087WUU8 490 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SHISA8B8ZZ34 492 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 IMPA2O14732 288 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ATG12O94817 140 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PPP1R3DO95685 299 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 HPRP00739 348 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 CSTAP01040 98 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 RHCEP18577 417 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 RAB3BP20337 219 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SOX18P35713 384 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NANPQ8TBE9 248 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 HLA-CQ95604 372 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 MRPS14O60783 128 aaKnown RBP13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PPM1BO75688 479 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PSMB10P40306 273 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GZMMP51124 257 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 BLKP51451 505 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TEX12Q9BXU0 123 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TINAGL1Q9GZM7 467 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ACTR6Q9GZN1 396 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SIRT3Q9NTG7 399 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 RPH3AQ9Y2J0 694 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ZNF407Q9C0G0 2248 aa13.08□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TVP23AA6NH52 213 aa13.07□□□□□ -0.32
TNFRSF11A-201ENST00000269485 C17orf105B2RV13 164 aa13.07□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PROM1O43490 865 aa13.07□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SIX6O95475 246 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms