RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 LTBQ06643 244 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 B3GLCTQ6Y288 498 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 OR2T11Q8NH01 316 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 TIMM29Q9BSF4 260 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 DUSP23Q9BVJ7 150 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 FAM234AQ9H0X4 552 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 RABL2AQ9UBK7 228 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 RABL2BQ9UNT1 228 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 CEBPZOSA8MTT3 80 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 OR7A17O14581 309 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 GASTP01350 101 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 MMP2P08253 660 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 F3P13726 295 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 ADRA1AP35348 466 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 RPS18P62269 152 aaKnown RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 EMX1Q04741 257 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 BATFQ16520 125 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 SLC35D2Q76EJ3 337 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 ESX1Q8N693 406 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 ULBP2Q9BZM5 246 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 BCAT2O15382 392 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 HTR5AP47898 357 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 BDH1Q02338 343 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 SF3A2Q15428 464 aaKnown RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 SLC9A3R2Q15599 337 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 SSX2Q16385 188 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF750Q32MQ0 723 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 TMEM64Q6YI46 380 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 KLHDC9Q8NEP7 349 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 ACOT11Q8WXI4 607 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 OR51J1Q9H342 316 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 B4DXG7 233 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TRAPPC2LH3BP13 241 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 OR2T1O43869 369 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ZFAND5O76080 213 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 HOXB5P09067 269 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 EFNA3P52797 238 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 INHBCP55103 352 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SPCS2Q15005 226 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TMEM176BQ3YBM2 270 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 NIPAL3Q6P499 406 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 CBLL1Q75N03 491 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 BRIX1Q8TDN6 353 aaKnown RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 GORASP2Q9H8Y8 452 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 EHFQ9NZC4 300 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 GMPR2Q9P2T1 348 aaKnown RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 PRAMEF27A3QJZ7 478 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 RPP30P78346 268 aaKnown RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TNK1Q13470 666 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 CAMK2DQ13557 499 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ARHGAP19Q14CB8 494 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SLC5A12Q1EHB4 618 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 PRAMEF9Q5VWM5 478 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 C18orf63Q68DL7 685 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SULF2Q8IWU5 870 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ATOH8Q96SQ7 321 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SUCNR1Q9BXA5 334 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 NOX3Q9HBY0 568 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 UBQLN4Q9NRR5 601 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 EMC3Q9P0I2 261 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ITGB4P16144 1822 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 MT-CO2P00403 227 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ARAFP10398 606 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 MYOGP15173 224 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 IL13RA1P78552 427 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 OR52W1Q6IF63 320 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TRNP1Q6NT89 227 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF587Q96SQ5 575 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ELF4Q99607 663 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 GALNT9Q9HCQ5 603 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 FUOMA2VDF0 154 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 GABRPO00591 440 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 AQP9O43315 295 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 NXPH3O95157 252 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 EGFP01133 1207 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 FCGR2AP12318 317 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 CPOXP36551 454 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 HTD2P86397 168 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TNFRSF17Q02223 184 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 RAB31Q13636 194 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SFRP5Q5T4F7 317 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 OR14A2Q96R54 314 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TMEM45AQ9NWC5 275 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF593O00488 134 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SIGLEC6O43699 453 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 MRPL33O75394 65 aaKnown RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 GPR75O95800 540 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 LPLP06858 475 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 CHATP28329 748 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 CSNK1DP48730 415 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 RRAS2P62070 204 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms