RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ZNF337Q9Y3M9 751 aa12.94□□□□□ -0.34
SDF2-201ENST00000247020 PTPRBP23467 1997 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 IRGMA1A4Y4 181 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 ZNF701M0R085 212 aaPredicted RBP12.93□□□□□ -0.34
SDF2-201ENST00000247020 M0R3G1 203 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 ETV2O00321 342 aaPredicted RBP12.93□□□□□ -0.34
SDF2-201ENST00000247020 BHLHE40O14503 412 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 PRODHO43272 600 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 TLX2O43763 284 aaPredicted RBP12.93□□□□□ -0.34
SDF2-201ENST00000247020 PRKYO43930 277 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 OR7A10O76100 309 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 NUDT14O95848 222 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 CXCR1P25024 350 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 TACR3P29371 465 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 SLC6A6P31641 620 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 OTX2P32243 289 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 SSR4P51571 173 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 MAP2K6P52564 334 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 MLF1P58340 268 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 PRPS1P60891 318 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 RPS18P62269 152 aaKnown RBP12.93□□□□□ -0.34
SDF2-201ENST00000247020 TBCEQ15813 527 aaPredicted RBP12.93□□□□□ -0.34
SDF2-201ENST00000247020 COL28A1Q2UY09 1125 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 H3F3CQ6NXT2 135 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 SLC30A6Q6NXT4 461 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 AHSA2Q719I0 299 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 RPS19BP1Q86WX3 136 aaKnown RBP12.93□□□□□ -0.34
SDF2-201ENST00000247020 MEX3DQ86XN8 651 aaKnown RBP12.93□□□□□ -0.34
SDF2-201ENST00000247020 OR4Q3Q8NH05 313 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 FCGR1BQ92637 280 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 MUL1Q969V5 352 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 PLEKHA8Q96JA3 519 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 FRMD6Q96NE9 622 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 IL4I1Q96RQ9 567 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 CCDC90BQ9GZT6 254 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 ERVK-18Q9QC07 812 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 WIF1Q9Y5W5 379 aa12.93□□□□□ -0.34
SDF2-201ENST00000247020 MPDZO75970 2070 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 KDM4EB2RXH2 506 aaPredicted RBP12.92□□□□□ -0.34
SDF2-201ENST00000247020 ENTPD6O75354 484 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 NDUFB2O95178 105 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 MT-ND2P03891 347 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 SERPINA7P05543 415 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 PTGDSP41222 190 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 SOX3P41225 446 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 RPS4XP62701 263 aaKnown RBP12.92□□□□□ -0.34
SDF2-201ENST00000247020 EMX1Q04741 257 aaPredicted RBP12.92□□□□□ -0.34
SDF2-201ENST00000247020 PMS2P3Q13401 168 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 RAB39AQ14964 217 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 QPRTQ15274 297 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 SYT14P1Q58G82 188 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 CLEC12AQ5QGZ9 265 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 RNLSQ5VYX0 342 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 JMJD6Q6NYC1 403 aaPredicted RBP12.92□□□□□ -0.34
SDF2-201ENST00000247020 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 GALNT15Q8N3T1 639 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 AMER2Q8N7J2 671 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 OR13C2Q8NGS9 318 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 OR6S1Q8NH40 331 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 ZNF420Q8TAQ5 688 aaPredicted RBP12.92□□□□□ -0.34
SDF2-201ENST00000247020 STK35Q8TDR2 534 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 ASB15Q8WXK1 588 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 SGCDQ92629 289 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 RFKQ969G6 155 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 NDEL1Q9GZM8 345 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 METTL7AQ9H8H3 244 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 MRPS18AQ9NVS2 196 aaKnown RBP12.92□□□□□ -0.34
SDF2-201ENST00000247020 P4HTMQ9NXG6 502 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 PPP4R1LQ9P1A2 415 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 OSGIN1Q9UJX0 560 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 FBXL4Q9UKA2 621 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.92□□□□□ -0.34
SDF2-201ENST00000247020 CPAMD8Q8IZJ3 1885 aa12.92□□□□□ -0.34
SDF2-201ENST00000247020 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 SPAARA0A1B0GVQ0 90 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 CDRT15L2A8MXV6 281 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 M0R129 80 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 TM4SF5O14894 197 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 SEC14L2O76054 403 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 CELA2AP08217 269 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 FUT1P19526 365 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 PTNP21246 168 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 APOBEC1P41238 236 aaKnown RBP12.91□□□□□ -0.34
SDF2-201ENST00000247020 CASP3P42574 277 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 GABREP78334 506 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 EGR4Q05215 589 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 FHL1Q13642 323 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 NEDD8Q15843 81 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 ZNF74Q16587 644 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 SLC25A53Q5H9E4 307 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 NXNL2Q5VZ03 156 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 ARHGAP11AQ6P4F7 1023 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 GPALPP1Q8IXQ4 340 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 STX19Q8N4C7 294 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 OR10G3Q8NGC4 313 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 OR5M3Q8NGP4 307 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 OR13F1Q8NGS4 319 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms