RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 FOXF1Q12946 379 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 TBR1Q16650 682 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 SLC25A53Q5H9E4 307 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 PGBD2Q6P3X8 592 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 IGFL3Q6UXB1 125 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 SNRNP27Q8WVK2 155 aaKnown RBP17.4■□□□□ 0.38
SBDS-201ENST00000246868 GTPBP3Q969Y2 492 aaKnown RBP17.4■□□□□ 0.38
SBDS-201ENST00000246868 DGCR6LQ9BY27 220 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 PAPOLBQ9NRJ5 636 aaKnown RBP17.4■□□□□ 0.38
SBDS-201ENST00000246868 SMPD3Q9NY59 655 aaPredicted RBP17.4■□□□□ 0.38
SBDS-201ENST00000246868 ENOPH1Q9UHY7 261 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 POFUT2Q9Y2G5 429 aa17.4■□□□□ 0.38
SBDS-201ENST00000246868 HTR3EA5X5Y0 456 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 LRRC3CA6NJW4 275 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 TAF4O00268 1085 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 NTN1O95631 604 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 GASTP01350 101 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 ITGB2P05107 769 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 POU2F1P14859 743 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 CCNA2P20248 432 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 PTNP21246 168 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 GSTM3P21266 225 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 GDF1P27539 372 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 ADH6P28332 368 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 MEOX1P50221 254 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 MAP2K6P52564 334 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 PLGLB1Q02325 96 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 FOXO1Q12778 655 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.39■□□□□ 0.384e-9■■□□□ 12.5
SBDS-201ENST00000246868 C1orf94Q6P1W5 598 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 FAM98AQ8NCA5 519 aaKnown RBP17.39■□□□□ 0.38
SBDS-201ENST00000246868 GNPDA2Q8TDQ7 276 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 SERINC1Q9NRX5 453 aa17.39■□□□□ 0.38
SBDS-201ENST00000246868 SPIN1Q9Y657 262 aaPredicted RBP17.39■□□□□ 0.38
SBDS-201ENST00000246868 PINLYPA6NC86 204 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 SUSD5O60279 629 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 IFI30P13284 250 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 ALDH6A1Q02252 535 aaKnown RBP17.39■□□□□ 0.37
SBDS-201ENST00000246868 PRKCDQ05655 676 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 CRYZQ08257 329 aaKnown RBP17.39■□□□□ 0.37
SBDS-201ENST00000246868 GLYR1Q49A26 553 aaPredicted RBP17.39■□□□□ 0.37
SBDS-201ENST00000246868 C5orf46Q6UWT4 87 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 PRICKLE2Q7Z3G6 844 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 ZER1Q7Z7L7 766 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 ADGRG3Q86Y34 549 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 PFN4Q8NHR9 129 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 BPIFA2Q96DR5 249 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 FAM46AQ96IP4 442 aaKnown RBP17.39■□□□□ 0.37
SBDS-201ENST00000246868 NIPSNAP1Q9BPW8 284 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 UCK2Q9BZX2 261 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 CHRNA9Q9UGM1 479 aa17.39■□□□□ 0.37
SBDS-201ENST00000246868 TMEFF2Q9UIK5 374 aaPredicted RBP17.39■□□□□ 0.37
SBDS-201ENST00000246868 MPDZO75970 2070 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 C7orf72A4D263 438 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 PIP5K1CO60331 668 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 TRAPPC6AO75865 159 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 TCEA1P23193 301 aaKnown RBP17.38■□□□□ 0.37
SBDS-201ENST00000246868 OMPP47874 163 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 CTBP2P56545 445 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 LSM11P83369 360 aaKnown RBP eCLIP17.38■□□□□ 0.37
SBDS-201ENST00000246868 COX10Q12887 443 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 RAET1LQ5VY80 246 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 ANKRD34AQ69YU3 496 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 GALNT5Q7Z7M9 940 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 GTPBP8Q8N3Z3 284 aaPredicted RBP17.38■□□□□ 0.37
SBDS-201ENST00000246868 OR14L1PQ8NHC6 308 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 EXTL1Q92935 676 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 RPH3AQ9Y2J0 694 aaPredicted RBP17.38■□□□□ 0.37
SBDS-201ENST00000246868 MRPS18CQ9Y3D5 142 aaKnown RBP17.38■□□□□ 0.37
SBDS-201ENST00000246868 CSAG2Q9Y5P2 127 aa17.38■□□□□ 0.37
SBDS-201ENST00000246868 A8MVM7 634 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 ZNF17P17021 662 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 FPR3P25089 353 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 FKBP2P26885 142 aaKnown RBP17.37■□□□□ 0.37
SBDS-201ENST00000246868 GPR4P46093 362 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.37■□□□□ 0.37
SBDS-201ENST00000246868 SLC22A16Q86VW1 577 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 P3H2Q8IVL5 708 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 STK35Q8TDR2 534 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 PIGQQ9BRB3 760 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 TTTY12Q9BZ98 90 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 UBQLN3Q9H347 655 aa17.37■□□□□ 0.37
SBDS-201ENST00000246868 MEPEQ9NQ76 525 aaPredicted RBP17.37■□□□□ 0.37
SBDS-201ENST00000246868 TNRC6AQ8NDV7 1962 aaKnown RBP17.36■□□□□ 0.37
SBDS-201ENST00000246868 IGKV1D-42A0A075B6H8 117 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 TMEM72A0PK05 275 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 ENO4A6NNW6 628 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 SHISA8B8ZZ34 492 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 ACOT7O00154 380 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 ZNF208O43345 1280 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 ZIC3O60481 467 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 SNAP29O95721 258 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 IGF2P01344 180 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 RFPL3SP0C7P2 107 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 SAGP10523 405 aaPredicted RBP17.36■□□□□ 0.37
SBDS-201ENST00000246868 ELK4P28324 431 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 TSPAN31Q12999 210 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 SELENBP1Q13228 472 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 C3orf33Q6P1S2 294 aa17.36■□□□□ 0.37
SBDS-201ENST00000246868 CD300LDQ6UXZ3 194 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms