RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PWWP2BQ6NUJ5 590 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 KLHL36Q8N4N3 616 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 OR5M3Q8NGP4 307 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 OR52N1Q8NH53 320 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 TMEM203Q969S6 136 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 CCNL2Q96S94 520 aaPredicted RBP16.91■□□□□ 0.3
HOXC11-201ENST00000243082 TEAD3Q99594 435 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 SLC19A3Q9BZV2 496 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 TXNL4BQ9NX01 149 aaKnown RBP16.91■□□□□ 0.3
HOXC11-201ENST00000243082 CHRNA9Q9UGM1 479 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 OR6C76A6NM76 312 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 MAGEB3O15480 346 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 NDUFB2O95178 105 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 PAICSP22234 425 aaKnown RBP16.91■□□□□ 0.3
HOXC11-201ENST00000243082 IL12BP29460 328 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 SOX6P35712 828 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 CCR4P51679 360 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 RPS25P62851 125 aaKnown RBP16.91■□□□□ 0.3
HOXC11-201ENST00000243082 IFITM3Q01628 133 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 TMED1Q13445 227 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 ZNF791Q3KP31 576 aaPredicted RBP16.91■□□□□ 0.3
HOXC11-201ENST00000243082 NKAIN1Q4KMZ8 207 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 ARMC4Q5T2S8 1044 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 SLC29A4Q7RTT9 530 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 C1orf210Q8IVY1 113 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 CYB561A3Q8NBI2 242 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 UFD1Q92890 307 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 CCDC74BQ96LY2 380 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 LAT2Q9GZY6 243 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 FBXL4Q9UKA2 621 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 VPS13AQ96RL7 3174 aa16.91■□□□□ 0.3
HOXC11-201ENST00000243082 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 SLC22A31A6NKX4 558 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 PATE3B3GLJ2 98 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 MCIDASD6RGH6 385 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 PLD2O14939 933 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 YKT6O15498 198 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 OR7A10O76100 309 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 CLUP10909 449 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 PNMTP11086 282 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 ZNF3P17036 446 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 CALRP27797 417 aaKnown RBP16.9■□□□□ 0.3
HOXC11-201ENST00000243082 ACSM1Q08AH1 577 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 ARHGAP11AQ6P4F7 1023 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 TMEM99Q8N816 258 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 ZFP41Q8N8Y5 198 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 SPRYD4Q8WW59 207 aaPredicted RBP16.9■□□□□ 0.3
HOXC11-201ENST00000243082 ERMAPQ96PL5 475 aaPredicted RBP16.9■□□□□ 0.3
HOXC11-201ENST00000243082 TIMP4Q99727 224 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 MESP1Q9BRJ9 268 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 OR51V1Q9H2C8 321 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 SYNDIG1Q9H7V2 258 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 QPCTLQ9NXS2 382 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 RARRES3Q9UL19 164 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 ADAMTS9Q9P2N4 1935 aa16.9■□□□□ 0.3
HOXC11-201ENST00000243082 IGHV3-20A0A0C4DH32 117 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ELOA3DA6NLF2 546 aaPredicted RBP16.89■□□□□ 0.29
HOXC11-201ENST00000243082 C12orf71A8MTZ7 269 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 SCRG1O75711 98 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ABCD3P28288 659 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 PLCXD2Q0VAA5 305 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ELOA3BQ3SY89 546 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ZNF322Q6U7Q0 402 aaPredicted RBP16.89■□□□□ 0.29
HOXC11-201ENST00000243082 DCDC5Q6ZRR9 648 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 SNX29P2Q8IUI4 249 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ACBD7Q8N6N7 88 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ELOA3Q8NG57 546 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 NAT6Q93015 286 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 OMA1Q96E52 524 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 BARHL1Q9BZE3 327 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 SIAEQ9HAT2 523 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ZNF337Q9Y3M9 751 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ASCC3Q8N3C0 2202 aaKnown RBP16.89■□□□□ 0.29
HOXC11-201ENST00000243082 IGF2P01344 180 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 PPP5CP53041 499 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ZNF117Q03924 483 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 MARCH3Q86UD3 253 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 C17orf47Q8NEP4 570 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 CHPT1Q8WUD6 406 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 ZC3H10Q96K80 434 aaKnown RBP16.89■□□□□ 0.29
HOXC11-201ENST00000243082 TM9SF2Q99805 663 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 TMEM43Q9BTV4 400 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 CAB39Q9Y376 341 aaPredicted RBP16.89■□□□□ 0.29
HOXC11-201ENST00000243082 IER3IP1Q9Y5U9 82 aa16.89■□□□□ 0.29
HOXC11-201ENST00000243082 A0A1W2PQD3 144 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 C17orf51A8MQB3 221 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 IDSB3KWA1 339 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 ALG1L2C9J202 215 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 IFNGP01579 166 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 HIST1H1CP16403 213 aaKnown RBP16.88■□□□□ 0.29
HOXC11-201ENST00000243082 GABRA5P31644 462 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 PNLIPRP2P54317 469 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 RPS7P62081 194 aaKnown RBP16.88■□□□□ 0.29
HOXC11-201ENST00000243082 RPS4XP62701 263 aaKnown RBP16.88■□□□□ 0.29
HOXC11-201ENST00000243082 EGR4Q05215 589 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 RGS21Q2M5E4 152 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 GXYLT1Q4G148 440 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 ZNF385CQ66K41 422 aaPredicted RBP16.88■□□□□ 0.29
HOXC11-201ENST00000243082 C22orf42Q6IC83 251 aa16.88■□□□□ 0.29
HOXC11-201ENST00000243082 CD200R1LQ6Q8B3 271 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms