RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TMEM164Q5U3C3 297 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CLDN22Q8N7P3 220 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TCEANCQ8N8B7 351 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 DEFB124Q8NES8 71 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 OSTF1Q92882 214 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TBC1D23Q9NUY8 699 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 GALNT8Q9NY28 637 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 IL20RAQ9UHF4 553 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 OR2J2O76002 312 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CELA2AP08217 269 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 OPRL1P41146 370 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 NBL1P41271 181 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SLC30A6Q6NXT4 461 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 Q6ZNX1 250 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 MRGPREQ86SM8 312 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CDK20Q8IZL9 346 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 MYDGFQ969H8 173 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TSSK6Q9BXA6 273 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 POLDIP3Q9BY77 421 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 PMF1-BGLAPU3KQ54 211 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 A0A1W2PQ72 361 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 UNC119BA6NIH7 251 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SOCS6O14544 535 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 PRKYO43930 277 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 GMFGO60234 142 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 EIF4E2O60573 245 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 STSP08842 583 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SAGP10523 405 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CD36P16671 472 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 NAGAP17050 411 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TGFBR1P36897 503 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 PCYT1AP49585 367 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 EFNB1P98172 346 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CRYZQ08257 329 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TMED1Q13445 227 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TBCEQ15813 527 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 PLAG1Q6DJT9 500 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 OR52D1Q9H346 318 aa17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.96■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SH3D21A4FU49 640 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ENDOUP21128 410 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC6A8P48029 635 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 EXT1Q16394 746 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TMEM201Q5SNT2 666 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 LYPD8Q6UX82 237 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ATG4DQ86TL0 474 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR13C2Q8NGS9 318 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR4Q3Q8NH05 313 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FANK1Q8TC84 345 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 DYNC2LI1Q8TCX1 351 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 HGDQ93099 445 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 CLN6Q9NWW5 311 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SIGLEC7Q9Y286 467 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TLX2O43763 284 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ENTPD6O75354 484 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 RAB40ALP0C0E4 278 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC1A3P43003 542 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SNAPC1Q16533 368 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ZNF563Q8TA94 476 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 BRIX1Q8TDN6 353 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FCGR1BQ92637 280 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FGF11Q92914 225 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 LGALS12Q96DT0 336 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SAMD8Q96LT4 415 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 RASL10BQ96S79 203 aa17.95■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PTPRZ1P23471 2315 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 M0R3G1 203 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 DKK1O94907 266 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 IGHEP01854 428 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ADRA2AP08913 450 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 IDUAP35475 653 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TMED10P49755 219 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TOMM34Q15785 309 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TMCO6Q96DC7 493 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ENKD1Q9H0I2 346 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 MMP25Q9NPA2 562 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 DNAJC27Q9NZQ0 273 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PCSK5Q92824 1860 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 IGKV1D-42A0A075B6H8 117 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 NSG1A0A0A6YYJ2 146 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 EFCAB9A8MZ26 197 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PNMTP11086 282 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ITPKBP27987 946 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ST3GAL4Q11206 333 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 NDUFAF7Q7L592 441 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PPP1R32Q7Z5V6 425 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 BCDIN3DQ7Z5W3 292 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR2T33Q8NG76 320 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR5W2Q8NH69 310 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 M1APQ8TC57 530 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC22A8Q8TCC7 542 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 DUSP19Q8WTR2 217 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 RNF138Q8WVD3 245 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 CCNL2Q96S94 520 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 HHATLQ9HCP6 504 aa17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FARSAQ9Y285 508 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PTPRBP23467 1997 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TRAV27A0A087WT01 109 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ELOA3DA6NLF2 546 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 NUDT14O95848 222 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms