RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Egln3Q91UZ4 239 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mfap3Q922T2 349 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 UqcrbQ9D855 111 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr933Q9EQA0 308 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Arpc1bQ9WV32 372 aaKnown RBP8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Clic1Q9Z1Q5 241 aaKnown RBP8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 IsxA1A546 240 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn2r65G3X931 845 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm20695H3BLK7 282 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cldn4O35054 210 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Oprl1P35377 367 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cks1bP61025 79 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Fbp2P70695 339 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Psmb4P99026 264 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Nufip2Q5F2E7 692 aaKnown RBP8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Sim2Q61079 657 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 PtprjQ64455 1238 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1229Q7TQZ9 311 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr412Q7TRW7 312 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Q810M1 233 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Smad3Q8BUN5 425 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Castor2Q8CAB8 329 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Pxdc1Q8JZU6 231 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn1r206Q8R277 312 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1342Q8VFY3 315 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tmem63aQ91YT8 804 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Sp2Q9D2H6 612 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mnx1Q9QZW9 404 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mettl23A2AA28 253 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr557E9Q550 322 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm21789J3QMZ1 123 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm21870J3QPN2 123 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Onecut1O08755 465 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Bmp8aP34821 399 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Grik2P39087 908 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Bmp8bP55105 399 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Arpp19P56212 112 aaKnown RBP8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Plp1P60202 277 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Plk3Q60806 631 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gngt2Q61017 69 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ssxb3Q6XAS4 170 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1505Q7TQQ2 316 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Q810S2 196 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Psmb11Q8BG41 302 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Grhl2Q8K5C0 625 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn1r229Q8R2A9 306 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1250Q8VGM3 314 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Caskin2Q8VHK1 1201 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tex47Q9D5W8 253 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wdr53Q9DB94 358 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 C1qtnf3Q9ES30 246 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zmym4A2A791 1549 aaKnown RBP8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr576A0A0G2JFH3 312 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 A0A286YDU1 74 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zfp334A2A4U6 679 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm3453K7N724 263 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 GzmeP08884 248 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 PdgfbP31240 241 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rhox12Q4TU81 186 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Dhrs13Q5SS80 376 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Samd10Q7TST3 202 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ssxb2Q8C5Z3 165 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn1r23Q8R2D0 302 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr63Q8VBW9 316 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr993Q8VF75 314 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Asb8Q91ZT9 288 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cers4Q9D6J1 393 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Prss21Q9JHJ7 324 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 PtgfrnQ9WV91 879 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 TpbgQ9Z0L0 426 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Kdm3aQ6PCM1 1323 aa8.39□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Fam170bE9PXT9 378 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Insl3O09107 122 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 ColqO35348 457 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Scd1P13516 355 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Pea15Q62048 130 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1140Q7TR39 311 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr845Q7TRG2 312 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Fam212bQ80VY2 300 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wdyhv1Q80WB5 209 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Clrn3Q8BHH8 226 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mob3cQ8BJG4 216 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Anapc13Q8R034 74 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mib2Q8R516 973 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1238Q8VG59 315 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gpr87Q99MT7 358 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mettl21AQ9CQL0 218 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zswim1Q9CWV7 455 aaKnown RBP8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Fundc2Q9D6K8 151 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ccdc107Q9DCC3 242 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 IbtkQ6ZPR6 1352 aaKnown RBP8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Trav7n-5A0A075B604 112 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr573-ps1A0A1B0GRU2 297 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm14744B1AVU4 173 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm4846B2RWH8 538 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Prr23a2D3YWX5 253 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn1r20K7N778 303 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr743L7N1Y2 311 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm3424L7N298 263 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wsb1O54927 421 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms