RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Matn3O35701 481 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NelfeP19426 375 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pcmt1P23506 227 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tnfrsf1bP25119 474 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ptger4P32240 513 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ctbp2P56546 445 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Eef1a2P62631 463 aaKnown RBP9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ScapQ6GQT6 1276 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr298Q7TS06 332 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hmbox1Q8BJA3 419 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfpm2Q8CCH7 1151 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ddit4lQ8VHZ5 193 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Eif2b1Q99LC8 305 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Coq5Q9CXI0 327 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ApmapQ9D7N9 415 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NrapQ80XB4 1728 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr619E9PV95 320 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm17067E9Q6S4 354 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm2035J3QP87 144 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fbxw15L7N1X6 466 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 CryabP23927 175 aaKnown RBP9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Isl1P61372 349 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ap2s1P62743 142 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Wbp2P97765 261 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Treml2Q2LA85 329 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fahd2Q3TC72 313 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Alkbh2Q6P6J4 239 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ChdhQ8BJ64 596 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Uhrf1Q8VDF2 782 aaKnown RBP9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr340Q8VGL0 312 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mgat2Q921V5 442 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Kcne5Q9QZ26 143 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm498D3YYH9 372 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cacng2O88602 323 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Kcnj5P48545 419 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 VaspP70460 375 aaKnown RBP9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 SgcbP82349 320 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tbc1d24Q3UUG6 561 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ccdc116Q80X53 541 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Utp15Q8C7V3 528 aaKnown RBP9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Crb3Q8QZT4 113 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr120Q8VFQ2 330 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rnf167Q91XF4 347 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Akirin1Q99LF1 191 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 SelenosQ9BCZ4 190 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Bud23Q9CY21 281 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 GmfgQ9ERL7 142 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Raet1dQ9JI58 249 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fbxo6Q9QZN4 295 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm364A2AFI6 671 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 4931429L15RikE9PVU2 379 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm10037E9PX85 104 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm9493F6SVV1 192 aaKnown RBP9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gstm2P15626 218 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 PitpnbP53811 271 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Polr2iP60898 125 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vamp2P63044 116 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lpar4Q8BLG2 370 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 PxnQ8VI36 591 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mlf2Q99KX1 247 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mettl18Q9CZ09 362 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 ItgaxQ9QXH4 1169 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Dok3Q9QZK7 444 aa9.65□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Dcaf4A0A1Y7VNZ0 532 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ankle1A8VU90 534 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fam84bD3YXJ5 310 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc30a4O35149 430 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rasd1O35626 280 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 HckP08103 524 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cd63P41731 238 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Atf4Q06507 349 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 TfptQ3U1J1 259 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 CstbQ62426 98 aaKnown RBP9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Chil6Q80W26 440 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Creg2Q8BGC9 288 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Znf770Q8BIQ8 705 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem62Q8BXJ9 643 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn1r212Q8R268 357 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Q8R3C1 574 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr165Q8VFA2 313 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr514Q8VFZ6 310 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 VitQ8VHI5 650 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Sfxn5Q925N0 342 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Arv1Q9D0U9 266 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem138Q9D6G5 162 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc9a3r2Q9JHL1 337 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fiz1Q9WTJ4 500 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 RlimQ9WTV7 600 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cfap77A0A087WRI3 283 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Scgb1b30A2BH64 92 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem235B1AQL3 211 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rnaset2aC0HKG5 259 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rnaset2bC0HKG6 259 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fam170bE9PXT9 378 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Kcnmb3E9Q7U0 239 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gmeb2P58929 530 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cln6Q3U466 308 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hsh2dQ6VYH9 334 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1101Q7TR59 310 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Apoa5Q8C7G5 368 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 82.9 ms