RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 GABRA1P14867 456 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 BMP5P22003 454 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 TCEA1P23193 301 aaKnown RBP6.66□□□□□ -1.34
PHGDH-225ENST00000641720 GDF1P27539 372 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 CCKARP32238 428 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 GSK3BP49841 420 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 CRISP3P54108 245 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PCBP3P57721 371 aaKnown RBP6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PLGLB1Q02325 96 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 LIPEQ05469 1076 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 SKP2Q13309 424 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 FGFBP1Q14512 234 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 HSPB2Q16082 182 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 DCST1Q5T197 706 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 AP1ARQ63HQ0 302 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 CBLN3Q6UW01 205 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF836Q6ZNA1 936 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ARPINQ7Z6K5 226 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ADGRE4PQ86SQ3 457 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 SERPINA11Q86U17 422 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PACS2Q86VP3 889 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 VRK2Q86Y07 508 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PLCZ1Q86YW0 608 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 RNF148Q8N7C7 305 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 FADS6Q8N9I5 356 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 C11orf65Q8NCR3 313 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 RBM15BQ8NDT2 890 aaKnown RBP6.66□□□□□ -1.34
PHGDH-225ENST00000641720 FAM71CQ8NEG0 241 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 OR2M3Q8NG83 312 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 OR52P1PQ8NH57 321 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 BBS10Q8TAM1 723 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PHOSPHO1Q8TCT1 267 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 DUSP19Q8WTR2 217 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 WDR60Q8WVS4 1066 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PMM1Q92871 262 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 TAMM41Q96BW9 452 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 SARAFQ96BY9 339 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 REXO5Q96IC2 774 aaKnown RBP6.66□□□□□ -1.34
PHGDH-225ENST00000641720 NSL1Q96IY1 281 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 GNRHR2Q96P88 292 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 HOXD1Q9GZZ0 328 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 BCL2L10Q9HD36 194 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ACKR4Q9NPB9 350 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 THUMPD1Q9NXG2 353 aaKnown RBP6.66□□□□□ -1.34
PHGDH-225ENST00000641720 MED11Q9P086 117 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PPP4R1LQ9P1A2 415 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 BOKQ9UMX3 212 aaPredicted RBP6.66□□□□□ -1.34
PHGDH-225ENST00000641720 EDARQ9UNE0 448 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ANGPT4Q9Y264 503 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF443Q9Y2A4 671 aaPredicted RBP6.66□□□□□ -1.34
PHGDH-225ENST00000641720 CHST2Q9Y4C5 530 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 TESMINQ9Y4I5 508 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 DTNAQ9Y4J8 743 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 TRGV5A0A0B4J1U4 118 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 A0A0G2JPF8 293 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HNRNPCL2B2RXH8 293 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HNRNPCL3B7ZW38 293 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 SHISA8B8ZZ34 492 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 AP3D1O14617 1153 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 DVL2O14641 736 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 SMAD7O15105 426 aaKnown RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HCRTR2O43614 444 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 NDUFB5O43674 189 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HNRNPCL1O60812 293 aaKnown RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 OPN1SWP03999 348 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 THBS1P07996 1170 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 UBTFL6P0CB48 400 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HNRNPCL4P0DMR1 293 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 NID1P14543 1247 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HPGDP15428 266 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 CALB2P22676 271 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 PGM1P36871 562 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 EEF1A1P68104 462 aaKnown RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 MXRA7P84157 204 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 RBBP4Q09028 425 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 FOXF2Q12947 444 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 GNA13Q14344 377 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 VMACQ2NL98 169 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 MRPL2Q5T653 305 aaKnown RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 WLSQ5T9L3 541 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 PRAMEF8Q5VWM4 474 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 PRAMEF7Q5VXH5 474 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 NSUN5P2Q63ZY6 315 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 REEP3Q6NUK4 255 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 C6orf89Q6UWU4 347 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 C22orf34Q6ZV56 151 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 YTHDF3Q7Z739 585 aaKnown RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 YRDCQ86U90 279 aaKnown RBP6.65□□□□□ -1.34
PHGDH-225ENST00000641720 IFNEQ86WN2 208 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 MICU2Q8IYU8 434 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 DEFB107AQ8IZN7 70 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 PGAM4Q8N0Y7 254 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 CLIP4Q8N3C7 705 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 TMCO5AQ8N6Q1 288 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF527Q8NB42 609 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 FAM156AQ8NDB6 213 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 HIPK4Q8NE63 616 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 OR2T12Q8NG77 320 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 OR4K17Q8NGC6 315 aa6.65□□□□□ -1.34
PHGDH-225ENST00000641720 OR1J4Q8NGS1 313 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms