RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FGFBP1Q14512 234 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 ARHGAP11BQ3KRB8 267 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 HES5Q5TA89 166 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF425Q6IV72 752 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 GATSQ8NAP1 163 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 ING4Q9UNL4 249 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 ZSCAN5BA6NJL1 495 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 IDSB3KWA1 339 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 SGK494L7N484 410 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 CHP2O43745 196 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 STOMP27105 288 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-221ENST00000640341 AMZ1Q400G9 498 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 FAAH2Q6GMR7 532 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 LINGO2Q7L985 606 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 PLCZ1Q86YW0 608 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF655Q8N720 491 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-221ENST00000640341 THAP4Q8WY91 577 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 KISS1RQ969F8 398 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-221ENST00000640341 RERGQ96A58 199 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-221ENST00000640341 CREB3L1Q96BA8 519 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 CLIP3Q96DZ5 547 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 DERL3Q96Q80 235 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ANKRD19PQ9H560 264 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF346Q9UL40 294 aaKnown RBP13.49□□□□□ -0.25
SCARB2-221ENST00000640341 HLA-DQB1P01920 261 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 NID1P14543 1247 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 TYRP1P17643 537 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ATF1P18846 271 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 AHCYP23526 432 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 NDUFS1P28331 727 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 RPS15AP62244 130 aaKnown RBP13.49□□□□□ -0.25
SCARB2-221ENST00000640341 TFF2Q03403 129 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 CAMK2BQ13554 666 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ALG10BQ5I7T1 473 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 RFPL4BQ6ZWI9 263 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 TRILQ7L0X0 811 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 PAQR7Q86WK9 346 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 C10orf53Q8N6V4 93 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 OR11H7Q8NGC8 314 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ACOT12Q8WYK0 555 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 RSPH9Q9H1X1 276 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-221ENST00000640341 DPAGT1Q9H3H5 408 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 FLVCR2Q9UPI3 526 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 SIGLEC7Q9Y286 467 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 SEC16AO15027 2179 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ACOD1A6NK06 481 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ADAM11O75078 769 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 OR3A3P47888 321 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF85Q03923 595 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 DUSP8Q13202 625 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 PRAMEF8Q5VWM4 474 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 PRAMEF7Q5VXH5 474 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 FIGLAQ6QHK4 219 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 PARGQ86W56 976 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 OR2L13Q8N349 312 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 HSD17B8Q92506 261 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 CMC2Q9NRP2 79 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 SLC17A4Q9Y2C5 497 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 IER3IP1Q9Y5U9 82 aa13.49□□□□□ -0.25
SCARB2-221ENST00000640341 TRBV2A0A0J9YWF9 115 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 SOX30O94993 753 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 TCRBP04435 133 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 DBIP07108 87 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 EDNRAP25101 427 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF81P51508 661 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 CCR4P51679 360 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 VSX2P58304 361 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ERV3-1Q14264 604 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF776Q68DI1 518 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 HEPHL1Q6MZM0 1159 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 FAAP20Q6NZ36 180 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 LUZP2Q86TE4 346 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 LNX2Q8N448 690 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 NR4A3Q92570 626 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ZC3HAV1LQ96H79 300 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 CCDC3Q9BQI4 270 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 DPCDQ9BVM2 203 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 PIGUQ9H490 435 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ERVMER34-1Q9H9K5 563 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ADGRL4Q9HBW9 690 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 OR6C2Q9NZP2 312 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 KCMF1Q9P0J7 381 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 EIF3KQ9UBQ5 218 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 PHF11Q9UIL8 331 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 A0A1B0GWA3 101 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 H0YGG7 62 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 SCO1O75880 301 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ARF3P61204 181 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 PPP1CAP62136 330 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 RPL6Q02878 288 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 GPM6BQ13491 265 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 KIAA1324Q6UXG2 1013 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 RNF44Q7L0R7 432 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 HYLS1Q96M11 299 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms