RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 VANGL1Q8TAA9 524 aaPredicted RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 NT5CQ8TCD5 201 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 SPPL2AQ8TCT8 520 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 FAR1Q8WVX9 515 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 STARD8Q92502 1023 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 UBE2E3Q969T4 207 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 C12orf43Q96C57 262 aaKnown RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 MTERF3Q96E29 417 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 ZNF285Q96NJ3 590 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 SIGLEC11Q96RL6 698 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 TSC22D3Q99576 134 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 PITX2Q99697 317 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 IFT22Q9H7X7 185 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 SLC35C2Q9NQQ7 365 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 CTPS2Q9NRF8 586 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 SLC22A11Q9NSA0 550 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 MAN2C1Q9NTJ4 1040 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 CUTCQ9NTM9 273 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 DDX18Q9NVP1 670 aaKnown RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 THUMPD1Q9NXG2 353 aaKnown RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 ANKMY1Q9P2S6 941 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 KCNE5Q9UJ90 142 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 NDRG4Q9ULP0 352 aaKnown RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 A4GNTQ9UNA3 340 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 MAPRE3Q9UPY8 281 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 FARSAQ9Y285 508 aaKnown RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 AP3M1Q9Y2T2 418 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 NAALAD2Q9Y3Q0 740 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 SAMHD1Q9Y3Z3 626 aaKnown RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 PCDHGA6Q9Y5G7 932 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 CLDN16Q9Y5I7 305 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 APC2O95996 2303 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 ANKRD11Q6UB99 2663 aaPredicted RBP5.54□□□□□ -1.52
ATM-229ENST00000639953 ACACBO00763 2458 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 BSNQ9UPA5 3926 aa5.54□□□□□ -1.52
ATM-229ENST00000639953 KALRNO60229 2985 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 A0A087WXM4 84 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 A0A0A6YYC8 382 aaPredicted RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 NPIPA5A0A0B4J1W7 369 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 SMIM31A0A1B0GVY4 71 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 A0A1B0GX78 115 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 HYKKA2RU49 373 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 PTGES3LE9PB15 166 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 NPIPA7E9PJI5 369 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 I3L1I5 382 aaPredicted RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 TNFRSF11BO00300 401 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 BCKDKO14874 412 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 DSCR3O14972 297 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 AHCYL1O43865 530 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 FCMRO60667 390 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 SRPX2O60687 465 aaPredicted RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 E2F6O75461 281 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 ERAL1O75616 437 aaKnown RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 SEC14L2O76054 403 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 LYPD3O95274 346 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 IGLV2-14P01704 120 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 KLK3P07288 261 aaPredicted RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 NPIPA8P0DM63 369 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 IGFBP5P24593 272 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 RYKP34925 604 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 KRT20P35900 424 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 CHI3L1P36222 383 aaPredicted RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 SSR2P43308 183 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 KCNJ5P48544 419 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 NCBP2P52298 156 aaKnown RBP eCLIP5.53□□□□□ -1.52
ATM-229ENST00000639953 PRKAG1P54619 331 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 PER3P56645 1201 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 RPS15AP62244 130 aaKnown RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 TUBA4AP68366 448 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 BLOC1S1P78537 153 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 DCDP81605 110 aaKnown RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 SPIBQ01892 262 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 NPRL3Q12980 569 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 IL10RAQ13651 578 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 SPCS2Q15005 226 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 CEBPEQ15744 281 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 MAPK14Q16539 360 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 SYT16Q17RD7 645 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 NKAIN1Q4KMZ8 207 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 FLYWCH1Q4VC44 716 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 IFI44LQ53G44 452 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 TRMT12Q53H54 448 aaKnown RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 TCTE1Q5JU00 501 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 GPR107Q5VW38 600 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 SLC48A1Q6P1K1 146 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 ZNF773Q6PK81 442 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 ZNF517Q6ZMY9 492 aaPredicted RBP5.53□□□□□ -1.52
ATM-229ENST00000639953 Q6ZNX1 250 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 SHISA6Q6ZSJ9 500 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 IKBIPQ70UQ0 350 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 COX15Q7KZN9 410 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 ASPGQ86U10 573 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 VRK2Q86Y07 508 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 HIPK1Q86Z02 1210 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 PRSS58Q8IYP2 241 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 FAM9CQ8IZT9 166 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 PARP8Q8N3A8 854 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 CLIP4Q8N3C7 705 aa5.53□□□□□ -1.52
ATM-229ENST00000639953 TRIML2Q8N7C3 387 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms