RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FAM234AQ9H0X4 552 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 IL21RQ9HBE5 538 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CHST11Q9NPF2 352 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SCML1Q9UN30 329 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 hCG_1818297A0A087WSY0 165 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CLDN5O00501 218 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SOCS2O14508 198 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ADAM12O43184 909 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FMO6PO60774 539 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CLDN1O95832 211 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MPSTP25325 297 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 LAP3P28838 519 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ERHP84090 104 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 HNRNPDQ14103 355 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SLC17A1Q14916 467 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ADIPOQQ15848 244 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF141Q15928 474 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 VASH2Q86V25 355 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 LRRN4CLQ8ND94 238 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MUL1Q969V5 352 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 BOCQ9BWV1 1114 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ACOT13Q9NPJ3 140 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SPO11Q9Y5K1 396 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CPQQ9Y646 472 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 YDJCA8MPS7 323 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FOXN1O15353 648 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 AP1G1O43747 822 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 IGHG1P01857 330 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 HPNP05981 417 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ADRB2P07550 413 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MRPL3P09001 348 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CELP19835 753 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SDHBP21912 280 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CSKP41240 450 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 GSK3BP49841 420 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SEC61A1P61619 476 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FBXL20Q96IG2 436 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ADGRG7Q96K78 797 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 COQ10AQ96MF6 247 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 OR51B6Q9H340 312 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 NDRG3Q9UGV2 375 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SRPK3Q9UPE1 567 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SLC35A3Q9Y2D2 325 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 KRBOX1C9JBD0 128 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF587BE7ETH6 402 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 EMC8O43402 210 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 JRKO75564 520 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 VIPR2P41587 438 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MAP2K3P46734 347 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 RPS13P62277 151 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 OR52E8Q6IFG1 317 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 LINGO4Q6UY18 593 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 OTOP1Q7RTM1 612 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ADIPOR2Q86V24 386 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 OR4M1Q8NGD0 313 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 LILRB1Q8NHL6 650 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ASB17Q8WXJ9 295 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FAXDC2Q96IV6 333 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ANKRD60Q9BZ19 345 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 NMUR2Q9GZQ4 415 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 TRAPPC2LQ9UL33 140 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 PCDHGC4Q9Y5F7 938 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 V9GYS6 101 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 LTN1O94822 1766 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 A0A1W2PPM1 405 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 TCRBV21S2A2A0A5A6 115 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CEBPDP49716 269 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF133P52736 654 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 PPP1CAP62136 330 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SLC14A1Q13336 389 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 PLEKHS1Q5SXH7 462 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 VHLLQ6RSH7 139 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 RBM15BQ8NDT2 890 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 NLGN4YQ8NFZ3 816 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 PRR11Q96HE9 360 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MRPL22Q9NWU5 206 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 TXNL4BQ9NX01 149 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ATRNL1Q5VV63 1379 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SERTM1A2A2V5 107 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 AGPAT2O15120 278 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 HTRA2O43464 458 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SPATA31C1P0DKV0 1188 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 RHOBP62745 196 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ARHGAP8P85298 464 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 GRB10Q13322 594 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 TPBGQ13641 420 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 COL5A1-AS1Q5SY13 56 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SHEQ5VZ18 495 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 GDF6Q6KF10 455 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FSTL4Q6MZW2 842 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MFSD12Q6NUT3 480 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 NLGN4XQ8N0W4 816 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MFSD4AQ8N468 514 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 NUP43Q8NFH3 380 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MYADMQ96S97 322 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MCHR1Q99705 422 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 P2RY13Q9BPV8 354 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SUCNR1Q9BXA5 334 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms