RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 THAP4Q8WY91 577 aa18.84■□□□□ 0.61
NEK3-208ENST00000618534 ABRACLQ9P1F3 81 aa18.84■□□□□ 0.61
NEK3-208ENST00000618534 SLC17A4Q9Y2C5 497 aa18.84■□□□□ 0.61
NEK3-208ENST00000618534 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.83■□□□□ 0.61
NEK3-208ENST00000618534 TRABD2BA6NFA1 517 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 P2RX6O15547 441 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 FLRT2O43155 660 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 PTP4A3O75365 173 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 DRD5P21918 477 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 ZNF81P51508 661 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 ACTC1P68032 377 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 ACTA1P68133 377 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 FHL5Q5TD97 284 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 PCNPQ8WW12 178 aaKnown RBP18.83■□□□□ 0.61
NEK3-208ENST00000618534 TMEM168Q9H0V1 697 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 CCDC86Q9H6F5 360 aaKnown RBP18.83■□□□□ 0.61
NEK3-208ENST00000618534 DLL4Q9NR61 685 aa18.83■□□□□ 0.61
NEK3-208ENST00000618534 C19orf53Q9UNZ5 99 aaPredicted RBP18.83■□□□□ 0.61
NEK3-208ENST00000618534 SSNA1O43805 119 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 TFP02787 698 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 NT5EP21589 574 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 GDI2P50395 445 aaKnown RBP18.83■□□□□ 0.6
NEK3-208ENST00000618534 RPS15AP62244 130 aaKnown RBP18.83■□□□□ 0.6
NEK3-208ENST00000618534 SAMD14Q8IZD0 417 aaPredicted RBP18.83■□□□□ 0.6
NEK3-208ENST00000618534 SIX5Q8N196 739 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 LCN9Q8WX39 176 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 MARVELD3Q96A59 401 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 ZMYND19Q96E35 227 aaPredicted RBP18.83■□□□□ 0.6
NEK3-208ENST00000618534 TNFRSF13CQ96RJ3 184 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 HAO2Q9NYQ3 351 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 CAMK2AQ9UQM7 478 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 AK6Q9Y3D8 172 aaKnown RBP18.83■□□□□ 0.6
NEK3-208ENST00000618534 RNF215Q9Y6U7 377 aa18.83■□□□□ 0.6
NEK3-208ENST00000618534 ZNF860A6NHJ4 632 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 MPC2O95563 127 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 DNASE1P24855 282 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 ZP1P60852 638 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 SNTB2Q13425 540 aaKnown RBP18.82■□□□□ 0.6
NEK3-208ENST00000618534 PDGFRLQ15198 375 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 VITQ6UXI7 678 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 USP53Q70EK8 1073 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 RPLP0P6Q8NHW5 317 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 PELI1Q96FA3 418 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 KIR3DX1Q9H7L2 352 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 A0A1B0GVI7 797 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 LRRC72A6NJI9 287 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 EML2O95834 649 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 PDGFAP04085 211 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 ADRB1P08588 477 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 SLC35G6P0C7Q6 338 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 HSF2Q03933 536 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 EXOSC2Q13868 293 aaKnown RBP18.82■□□□□ 0.6
NEK3-208ENST00000618534 CDK5R1Q15078 307 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 HSD17B12Q53GQ0 312 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 C2orf27AQ580R0 203 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 FGD2Q7Z6J4 655 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 TMEFF1Q8IYR6 380 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 NT5CQ8TCD5 201 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 LGALS14Q8TCE9 139 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 SLC2A12Q8TD20 617 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 SMIM19Q96E16 107 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 ASB16Q96NS5 453 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 OR14A2Q96R54 314 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 CDCP1Q9H5V8 836 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 NKIRAS2Q9NYR9 191 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 MRPL15Q9P015 296 aaKnown RBP18.82■□□□□ 0.6
NEK3-208ENST00000618534 DAPP1Q9UN19 280 aa18.82■□□□□ 0.6
NEK3-208ENST00000618534 FMO6PO60774 539 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 LDB3O75112 727 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SCO1O75880 301 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SERPINA3P01011 423 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 HPXP02790 462 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 IGFALSP35858 605 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 GDNFP39905 211 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 RAG2P55895 527 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 VSX2P58304 361 aaPredicted RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 SNTA1Q13424 505 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 GPR139Q6DWJ6 353 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 CMIPQ8IY22 773 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 OR51L1Q8NGJ5 315 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 OR56B4Q8NH76 319 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SMIM4Q8WVI0 70 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SERINC2Q96SA4 455 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 C7orf50Q9BRJ6 194 aaKnown RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 C20orf85Q9H1P6 137 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 ZCCHC4Q9H5U6 513 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 CXXC1Q9P0U4 656 aaPredicted RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 STON1Q9Y6Q2 735 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 RPS10-NUDT3A0A1W2PQS6 291 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 CIB4A0PJX0 185 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 OGG1O15527 345 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 GSTZ1O43708 216 aaPredicted RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 M6PRP20645 277 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 RPS11P62280 158 aaKnown RBP eCLIP18.81■□□□□ 0.6
NEK3-208ENST00000618534 SGCGQ13326 291 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 IKZF1Q13422 519 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 SUZ12Q15022 739 aaKnown RBP18.81■□□□□ 0.6
NEK3-208ENST00000618534 SLC22A10Q63ZE4 541 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 FBXO42Q6P3S6 717 aa18.81■□□□□ 0.6
NEK3-208ENST00000618534 PSRC1Q6PGN9 363 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms