RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 LURAP1Q96LR2 239 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 COL21A1Q96P44 957 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 BBS4Q96RK4 519 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 TRIB1Q96RU8 372 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 SORT1Q99523 831 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 TUBA1CQ9BQE3 449 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 QTRT1Q9BXR0 403 aaKnown RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 MIEF1Q9NQG6 463 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 C1orf109Q9NX04 203 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CNIH4Q9P003 139 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 SENP1Q9P0U3 644 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 ACAD8Q9UKU7 415 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 KLF2Q9Y5W3 355 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 WIF1Q9Y5W5 379 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 KCNE3Q9Y6H6 103 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 HCFC1P51610 2035 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CACNA1DQ01668 2161 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RP1L1Q8IWN7 2480 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 NINQ8N4C6 2090 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CACNA1CQ13936 2221 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 OR6C70A6NIJ9 312 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 SLC28A1O00337 649 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 TP53I11O14683 189 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 BCKDKO14874 412 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RGS14O43566 566 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 ZIC3O60481 467 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 PLOD3O60568 738 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 HCN1O60741 890 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 GUCY1B2O75343 617 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 C6orf47O95873 294 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 SCGB1D2O95969 90 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 OPN1LWP04000 364 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 LAMP1P11279 417 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 IL11P20809 199 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 IL12BP29460 328 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CHRNB4P30926 498 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 NTSP30990 170 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 GABRA3P34903 492 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 EVI2BP34910 448 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 ANXA11P50995 505 aaKnown RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 SUCLG1P53597 346 aaKnown RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 NME5P56597 212 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 LINC00205P59089 165 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 SRSF2Q01130 221 aaKnown RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 TLE4Q04727 773 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 BIKQ13323 160 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 PDE7AQ13946 482 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 HEPACAMQ14CZ8 416 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CD226Q15762 336 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CHI3L2Q15782 390 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 DUSP5Q16690 384 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CEP85LQ5SZL2 805 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 WLSQ5T9L3 541 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 MTFR2Q6P444 385 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 EMBQ6PCB8 327 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 ARSKQ6UWY0 536 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RGS9BPQ6ZS82 235 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 NUP54Q7Z3B4 507 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 MARCH3Q86UD3 253 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CLECL1Q8IZS7 167 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 GCNT2Q8N0V5 402 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 OR2L13Q8N349 312 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RIBC1Q8N443 379 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 MREGQ8N565 214 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 ANKRD42Q8N9B4 389 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 C17orf47Q8NEP4 570 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 OR2M3Q8NG83 312 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 OR5AK3PQ8NH89 298 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 OR14L1PQ8NHC6 308 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 LILRB4Q8NHJ6 448 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 MGARPQ8TDB4 240 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RND1Q92730 232 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CCDC126Q96EE4 140 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 HSPBAP1Q96EW2 488 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RMND5BQ96G75 393 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 ZNF845Q96IR2 970 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 TREX2Q9BQ50 279 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 LMF2Q9BU23 707 aaKnown RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 OR2B2Q9GZK3 357 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 IQCGQ9H095 443 aaKnown RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 CENPHQ9H3R5 247 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 LIME1Q9H400 295 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 DSN1Q9H410 356 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 REEP4Q9H6H4 257 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 CXorf36Q9H7Y0 433 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 ACKR4Q9NPB9 350 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RRAGDQ9NQL2 400 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 DDX18Q9NVP1 670 aaKnown RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 PNPOQ9NVS9 261 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 NMRK1Q9NWW6 199 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 GIN1Q9NXP7 522 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 COQ3Q9NZJ6 369 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 MED11Q9P086 117 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 SH3BP4Q9P0V3 963 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 PRODH2Q9UF12 536 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 ITGB1BP2Q9UKP3 347 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 RAB21Q9UL25 225 aa4.12□□□□□ -1.75
CUL3-216ENST00000617432 C19orf53Q9UNZ5 99 aaPredicted RBP4.12□□□□□ -1.75
CUL3-216ENST00000617432 STK38LQ9Y2H1 464 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms