RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PRRG4Q9BZD6 226 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 DYNC1I1O14576 645 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 FRS3O43559 492 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 PABPC4LP0CB38 370 aaKnown RBP14.98□□□□□ -0.01
CBWD3-211ENST00000615061 AQP1P29972 269 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 KIR2DL2P43627 348 aaPredicted RBP14.98□□□□□ -0.01
CBWD3-211ENST00000615061 CARD18P57730 90 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 EPS8Q12929 822 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 SCARB2Q14108 478 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 TRMT5Q32P41 509 aaKnown RBP14.98□□□□□ -0.01
CBWD3-211ENST00000615061 ZNF311Q5JNZ3 666 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 REP15Q6BDI9 236 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 C3orf33Q6P1S2 294 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 COMTD1Q86VU5 262 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 PTOV1Q86YD1 416 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 DMRTC2Q8IXT2 367 aaPredicted RBP14.98□□□□□ -0.01
CBWD3-211ENST00000615061 POU5F2Q8N7G0 328 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 STARD4Q96DR4 205 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 JKAMPQ9P055 326 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 MCTS1Q9ULC4 181 aaKnown RBP14.98□□□□□ -0.01
CBWD3-211ENST00000615061 CORO2BQ9UQ03 480 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 CAPN7Q9Y6W3 813 aa14.98□□□□□ -0.01
CBWD3-211ENST00000615061 CFAP73A6NFT4 308 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 FXYD1O00168 92 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 SYT5O00445 386 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 THBS1P07996 1170 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 KLK2P20151 261 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 CCNA2P20248 432 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 LSP1P33241 339 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 ACAA2P42765 397 aaKnown RBP14.97□□□□□ -0.01
CBWD3-211ENST00000615061 HOXC5Q00444 222 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 LARS2Q15031 903 aaKnown RBP14.97□□□□□ -0.01
CBWD3-211ENST00000615061 GUSBP1Q15486 140 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 MMEL1Q495T6 779 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 RNF220Q5VTB9 566 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 PRAMEF8Q5VWM4 474 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 PRAMEF7Q5VXH5 474 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 OR2A2Q6IF42 318 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 NANOGP8Q6NSW7 305 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 REEP3Q6NUK4 255 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 GRINAQ7Z429 371 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 BTLAQ7Z6A9 289 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 SERPINA11Q86U17 422 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 ADGRG3Q86Y34 549 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 OR5B2Q96R09 309 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 TMEM38AQ9H6F2 299 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 KAT8Q9H7Z6 458 aaKnown RBP14.97□□□□□ -0.01
CBWD3-211ENST00000615061 NANOGQ9H9S0 305 aa14.97□□□□□ -0.01
CBWD3-211ENST00000615061 IGHV3-15A0A0B4J1V0 119 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 GJE1A6NN92 205 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 MRASO14807 208 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 SLC6A2P23975 617 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 SLC7A1P30825 629 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 ZNF239Q16600 458 aaKnown RBP14.96□□□□□ -0.01
CBWD3-211ENST00000615061 CYP51A1Q16850 503 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 FBXL19-AS1Q494R0 122 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 GLIPR1L2Q4G1C9 344 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 RABL3Q5HYI8 236 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 PDSS1Q5T2R2 415 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 SPATA21Q7Z572 469 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 OR10A6Q8NH74 314 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 ARL5BQ96KC2 179 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 SPATA9Q9BWV2 254 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 OR11A1Q9GZK7 315 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 PIF1Q9H611 641 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 PAQR5Q9NXK6 330 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-211ENST00000615061 CHRNA9Q9UGM1 479 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 PACSIN3Q9UKS6 424 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 ZNF232Q9UNY5 417 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 IFT52Q9Y366 437 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 PDZD2O15018 2839 aa14.96□□□□□ -0.01
CBWD3-211ENST00000615061 ANKRD17O75179 2603 aaKnown RBP14.96□□□□□ -0.01
CBWD3-211ENST00000615061 TPST1O60507 370 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 SMNDC1O75940 238 aaKnown RBP eCLIP14.96□□□□□ -0.02
CBWD3-211ENST00000615061 SYNGR4O95473 234 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 FCGR2AP12318 317 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 ETS2P15036 469 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 DRD4P21917 467 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 ENPP1P22413 925 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 TACR3P29371 465 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 APOBEC1P41238 236 aaKnown RBP14.96□□□□□ -0.02
CBWD3-211ENST00000615061 SYT14P1Q58G82 188 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 MTDHQ86UE4 582 aaKnown RBP14.96□□□□□ -0.02
CBWD3-211ENST00000615061 ABHD3Q8WU67 409 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 RNASE6Q93091 150 aaKnown RBP14.96□□□□□ -0.02
CBWD3-211ENST00000615061 LRRC58Q96CX6 371 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 OPN3Q9H1Y3 402 aaPredicted RBP14.96□□□□□ -0.02
CBWD3-211ENST00000615061 SERINC1Q9NRX5 453 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 MRGBPQ9NV56 204 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 OSGIN1Q9UJX0 560 aa14.96□□□□□ -0.02
CBWD3-211ENST00000615061 A8MXE2 369 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 CRHP06850 196 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 SLC1A3P43003 542 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 GNGT1P63211 74 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 CYLC2Q14093 348 aaPredicted RBP14.95□□□□□ -0.02
CBWD3-211ENST00000615061 MAPRE2Q15555 327 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 TREML1Q86YW5 311 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 CADM2Q8N3J6 435 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 HIPK4Q8NE63 616 aa14.95□□□□□ -0.02
CBWD3-211ENST00000615061 CPNE4Q96A23 557 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms