RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 OR2M5A3KFT3 312 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 ELOA3DA6NLF2 546 aaPredicted RBP13.3□□□□□ -0.28
CD48-203ENST00000613788 NPIPA5E9PKD4 350 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 GNGT2O14610 69 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 FFAR1O14842 300 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 ADAMDEC1O15204 470 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 CHP2O43745 196 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 SUSD5O60279 629 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 HCN1O60741 890 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 KRT36O76013 467 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 PRSS23O95084 383 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 H1F0P07305 194 aaKnown RBP13.3□□□□□ -0.28
CD48-203ENST00000613788 CELA3AP09093 270 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 CHMP24386 653 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 FASP25445 335 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 ELK4P28324 431 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 TRAM2Q15035 370 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 ELOA3BQ3SY89 546 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 CMPK2Q5EBM0 449 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 OR2T5Q6IEZ7 315 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 GDF7Q7Z4P5 450 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 ATG4DQ86TL0 474 aaPredicted RBP13.3□□□□□ -0.28
CD48-203ENST00000613788 TSPYL5Q86VY4 417 aaPredicted RBP13.3□□□□□ -0.28
CD48-203ENST00000613788 ADGRG3Q86Y34 549 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 OFCC1Q8IZS5 231 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 PIK3C3Q8NEB9 887 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 ELOA3Q8NG57 546 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 OR2T29Q8NH02 315 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 SFXN2Q96NB2 322 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 ANKRD19PQ9H560 264 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 EXO5Q9H790 373 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 S100A14Q9HCY8 104 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 SLC7A7Q9UM01 511 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 NPIPA1Q9UND3 350 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 TMED7Q9Y3B3 224 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 SPIN1Q9Y657 262 aaPredicted RBP13.3□□□□□ -0.28
CD48-203ENST00000613788 USP24Q9UPU5 2620 aa13.3□□□□□ -0.28
CD48-203ENST00000613788 A0A087WUJ7 227 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 TTLL8A6PVC2 850 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SHISA8B8ZZ34 492 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 DEAF1O75398 565 aaPredicted RBP13.29□□□□□ -0.28
CD48-203ENST00000613788 TIPRLO75663 272 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 GADD45GO95257 159 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 IGHG3P01860 377 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 RRM2P31350 389 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 B3GALT5-AS1P59052 145 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 FOXK1P85037 733 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SPIBQ01892 262 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 KRTCAP3Q53RY4 240 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 POMZP3Q6PJE2 187 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 ZNF605Q86T29 641 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SIAH3Q8IW03 269 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 OR5M1Q8NGP8 315 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 NEIL3Q8TAT5 605 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 FAR1Q8WVX9 515 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
CD48-203ENST00000613788 HS6ST2Q96MM7 605 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 NPAS1Q99742 590 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SLC6A15Q9H2J7 730 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 RHCGQ9UBD6 479 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 DNAJB9Q9UBS3 223 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 CHRNA9Q9UGM1 479 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 TESMINQ9Y4I5 508 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 HEATR5AQ86XA9 2040 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 A0A1W2PRQ8 180 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 CLOCKO15516 846 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 ACTL6AO96019 429 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 THY1P04216 161 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 GFRA1P56159 465 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 RAC1P63000 192 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SELENBP1Q13228 472 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 DGCR6Q14129 220 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 ZNF324BQ6AW86 544 aaPredicted RBP13.29□□□□□ -0.28
CD48-203ENST00000613788 C3orf33Q6P1S2 294 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 TTC33Q6PID6 262 aaPredicted RBP13.29□□□□□ -0.28
CD48-203ENST00000613788 LINC00114Q6XXX2 140 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 TRILQ7L0X0 811 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SLC25A43Q8WUT9 341 aaPredicted RBP13.29□□□□□ -0.28
CD48-203ENST00000613788 DHRS1Q96LJ7 313 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 TSPAN10Q9H1Z9 355 aaPredicted RBP13.29□□□□□ -0.28
CD48-203ENST00000613788 REEP1Q9H902 201 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 SLC6A5Q9Y345 797 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 ZNF337Q9Y3M9 751 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 AP4B1Q9Y6B7 739 aa13.29□□□□□ -0.28
CD48-203ENST00000613788 ITPR1Q14643 2758 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 PIEZO2Q9H5I5 2752 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 BOD1L1Q8NFC6 3051 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 A0A1B0GVC2 190 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 GJE1A6NN92 205 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 H3BNX3 289 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 ZNF208O43345 1280 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 LYPD3O95274 346 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 LDLRP01130 860 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 PEPDP12955 493 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 CCNA2P20248 432 aa13.28□□□□□ -0.28
CD48-203ENST00000613788 RBM34P42696 430 aaKnown RBP13.28□□□□□ -0.28
CD48-203ENST00000613788 CLK1P49759 484 aaKnown RBP13.28□□□□□ -0.28
CD48-203ENST00000613788 HMGA2P52926 109 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms