RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	OR5T3	Q8NGG3	340 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	GATAD2B	Q8WXI9	593 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	UFD1	Q92890	307 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	SPOCK3	Q9BQ16	436 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	NUDT22	Q9BRQ3	303 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	SERTAD3	Q9UJW9	196 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	PCDHGA5	Q9Y5G8	931 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	CDH10	Q9Y6N8	788 aa		12.82	□□□□□ -0.36
COPS7B-223	ENST00000611614	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614		A0A087WV62	115 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	OR6C70	A6NIJ9	312 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	TMEM150C	B9EJG8	249 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	NSA2	O95478	260 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CH25H	O95992	272 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	DBI	P07108	87 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	LIMS3	P0CW19	117 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	LIMS4	P0CW20	117 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ALAS2	P22557	587 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	GABRA5	P31644	462 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CSF2RB	P32927	897 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	RAB38	P57729	211 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CD83	Q01151	205 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CFHR1	Q03591	330 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	KCNAB1	Q14722	419 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CCDC58	Q4VC31	144 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CCNJ	Q5T5M9	372 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	RANBP3L	Q86VV4	465 aa	Predicted RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ADAMTS18	Q8TE60	1221 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	TM9SF4	Q92544	642 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF285	Q96NJ3	590 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	KATNB1	Q9BVA0	655 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ADAP2	Q9NPF8	381 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ING3	Q9NXR8	418 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ADAM30	Q9UKF2	790 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614		A0A0B4J293	547 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CENPVL1	A0A0U1RR11	272 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	STX11	O75558	287 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ATP1B1	P05026	303 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	HMGN1	P05114	100 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CTSB	P07858	339 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CLEC2L	P0C7M8	214 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	RNH1	P13489	461 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	RPS4Y1	P22090	263 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	CFL1	P23528	166 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	GABRA4	P48169	554 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	RPS25	P62851	125 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	EFR3A	Q14156	821 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614		Q5BKY6	102 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	DCST2	Q5T1A1	773 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	UTS2B	Q765I0	119 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	SHF	Q7M4L6	423 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	D2HGDH	Q8N465	521 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	TMEM203	Q969S6	136 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	RNF31	Q96EP0	1072 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	MMAB	Q96EY8	250 aa	Predicted RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	DPYSL5	Q9BPU6	564 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	SATB2	Q9UPW6	733 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	SF3B6	Q9Y3B4	125 aa	Known RBP	12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	UNC13C	Q8NB66	2214 aa		12.81	□□□□□ -0.36
COPS7B-223	ENST00000611614	USP34	Q70CQ2	3546 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	TRAPPC13	A5PLN9	417 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CHST10	O43529	356 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	FGF17	O60258	216 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	PLOD3	O60568	738 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	LDB3	O75112	727 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF780A	O75290	641 aa	Predicted RBP	12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	SLC43A1	O75387	559 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	GPR75	O95800	540 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	SLC2A2	P11168	524 aa	Predicted RBP	12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	TGM4	P49221	684 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	MZT2A	Q6P582	158 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZCCHC12	Q6PEW1	402 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CD200R1L	Q6Q8B3	271 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	YIPF7	Q8N8F6	280 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CDRT4	Q8N9R6	151 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	OR2T33	Q8NG76	320 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	DOK4	Q8TEW6	326 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	SLC41A2	Q96JW4	573 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	ARHGAP9	Q9BRR9	750 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	NDC1	Q9BTX1	674 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	SPRTN	Q9H040	489 aa	Predicted RBP	12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	PPP1R3E	Q9H7J1	279 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	DUSP22	Q9NRW4	184 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	EXOG	Q9Y2C4	368 aa	Known RBP	12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	TRDV1	A0A1B0GX56	115 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	BLACE	A4D250	179 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CYR61	O00622	381 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CLDN4	O14493	209 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	NT5E	P21589	574 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	SLC1A3	P43003	542 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CLDN20	P56880	219 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	SQSTM1	Q13501	440 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	DSG2	Q14126	1118 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	SF3A2	Q15428	464 aa	Known RBP	12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	MAPK14	Q16539	360 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	TATDN3	Q17R31	274 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CRTC2	Q53ET0	693 aa	Predicted RBP	12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	CREB3L2	Q70SY1	520 aa		12.8	□□□□□ -0.36
COPS7B-223	ENST00000611614	ZNF485	Q8NCK3	441 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms