RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 HMGCLL1Q8TB92 370 aa6.75□□□□□ -1.33
CSDE1-218ENST00000610726 CDX2Q99626 313 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-218ENST00000610726 ACER3Q9NUN7 267 aa6.75□□□□□ -1.33
CSDE1-218ENST00000610726 VNN3Q9NY84 501 aa6.75□□□□□ -1.33
CSDE1-218ENST00000610726 WNT16Q9UBV4 365 aa6.75□□□□□ -1.33
CSDE1-218ENST00000610726 POMT2Q9UKY4 750 aa6.75□□□□□ -1.33
CSDE1-218ENST00000610726 SCN3AQ9NY46 2000 aa6.75□□□□□ -1.33
CSDE1-218ENST00000610726 WDR90Q96KV7 1748 aa6.75□□□□□ -1.33
CSDE1-218ENST00000610726 A0A087WUU8 490 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 SMAD9O15198 467 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF208O43345 1280 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ALOX12BO75342 701 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ATE1O95260 518 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 LGI1O95970 557 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 GDF1P27539 372 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TGFBR2P37173 567 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PPP1CAP62136 330 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF45Q02386 682 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 GLO1Q04760 184 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CRMP1Q14194 572 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 C4orf46Q504U0 113 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 SLC6A19Q695T7 634 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TCTN3Q6NUS6 607 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF782Q6ZMW2 699 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF836Q6ZNA1 936 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 MBOAT2Q6ZWT7 520 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TMED4Q7Z7H5 227 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CA13Q8N1Q1 262 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 Q8N402 240 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 SLC15A4Q8N697 577 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 OR8S1Q8NH09 359 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CEP76Q8TAP6 659 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 OR2A14Q96R47 310 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 SEMA4GQ9NTN9 838 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 NOX1Q9Y5S8 564 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CEPT1Q9Y6K0 416 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 KDM4EB2RXH2 506 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 EEF1E1O43324 174 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PIP5K1CO60331 668 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 RGS9O75916 674 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PIAS2O75928 621 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 KDM4BO94953 1096 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 NID1P14543 1247 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TEAD1P28347 426 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 S100GP29377 79 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CD97P48960 835 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ARG2P78540 354 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ELAVL1Q15717 326 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 KDM4DQ6B0I6 523 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TCEAL6Q6IPX3 200 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PGBD2Q6P3X8 592 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PRSS41Q7RTY9 318 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 OR5W2Q8NH69 310 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 C16orf52Q8NHV5 167 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 IFI44Q8TCB0 444 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 C4orf36Q96KX1 117 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 KLHL15Q96M94 604 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 FUZQ9BT04 418 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PRDM7Q9NQW5 492 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CNOT2Q9NZN8 540 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 FARSAQ9Y285 508 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 AK6Q9Y3D8 172 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 BRCA1P38398 1863 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TTC28Q96AY4 2481 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TRAV6A0A075B6T7 132 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 IGHV1OR15-9A0A0B4J2B8 117 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 A0A1W2PQL4 384 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 HTR3EA5X5Y0 456 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 F5H5K5 113 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PTHP01270 115 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 POU2F2P09086 479 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 NME1P15531 152 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 RAB3BP20337 219 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 PRPH2P23942 346 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CRABP1P29762 137 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 EEF1A1P68104 462 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TBC1D25Q3MII6 688 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF517Q6ZMY9 492 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 LINC00696Q6ZRV3 163 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 MEPCEQ7L2J0 689 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 MSRB3Q8IXL7 192 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 RNF113BQ8IZP6 322 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 KDM8Q8N371 416 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 OR4C15Q8NGM1 316 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 NMNAT3Q96T66 252 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 ENPP5Q9UJA9 477 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CACNA1GO43497 2377 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 KCNE1BA0A087WTH5 132 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TCRBV5S2A0A599 114 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TMX2-CTNND1H3BSU7 103 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 SLC16A6O15403 523 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 OPRL1P41146 370 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 RAE1P78406 368 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 CD83Q01151 205 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 SRSF5Q13243 272 aaKnown RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TRAM1Q15629 374 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 TBCEQ15813 527 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-218ENST00000610726 HLA-BQ31612 363 aa6.74□□□□□ -1.33
CSDE1-218ENST00000610726 HES5Q5TA89 166 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms