RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 IFNW1P05000 195 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 CCNA2P20248 432 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 FUT4P22083 530 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 CHMP24386 653 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 TLE1Q04724 770 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 CCNIQ14094 377 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 C3AR1Q16581 482 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 C1orf146Q5VVC0 180 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 VASNQ6EMK4 673 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 GFRALQ6UXV0 394 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 PRICKLE2Q7Z3G6 844 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 ATG4DQ86TL0 474 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 SPATA24Q86W54 205 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 ADGRG3Q86Y34 549 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 SMPDL3BQ92485 455 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 ABTB1Q969K4 478 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 SLC47A1Q96FL8 570 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 TMEM185BQ9H7F4 350 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 A4GNTQ9UNA3 340 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 ENPP4Q9Y6X5 453 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 BAHCC1Q9P281 2608 aa18.06■□□□□ 0.48
SHKBP1-222ENST00000600320 TMED7-TICAM2A0A0A6YYA0 188 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 TCRBV3S1A0A5B6 114 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 TMEM72A0PK05 275 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 NPIPA2E9PIF3 369 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 NPIPA3F8WFD2 350 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 CIB2O75838 187 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 ACTL6AO96019 429 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 PEPDP12955 493 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 LHX2P50458 406 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 POLR2HP52434 150 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 CDH12P55289 794 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 PIN1Q13526 163 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 ARHGAP11AQ6P4F7 1023 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 AAGABQ6PD74 315 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 ATP6V1C2Q8NEY4 427 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 ADAMTS16Q8TE57 1224 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 MIB2Q96AX9 1013 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 TIMP4Q99727 224 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 NDUFAF4Q9P032 175 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 RPS6KB2Q9UBS0 482 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 TMED7Q9Y3B3 224 aa18.05■□□□□ 0.48
SHKBP1-222ENST00000600320 H0YC42 278 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 FFAR1O14842 300 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 DIRAS1O95057 198 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 PRSS23O95084 383 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 MT-ND1P03886 318 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 POU3F2P20265 443 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 ELK4P28324 431 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 GCKP35557 465 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 APOBEC1P41238 236 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 HTR3AP46098 478 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 TPD52P55327 224 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 CLDN15P56746 228 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 CLDN18P56856 261 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 CLDN20P56880 219 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 SELENBP1Q13228 472 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 ALG10BQ5I7T1 473 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 ZNF613Q6PF04 617 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 WDR88Q6ZMY6 472 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 GDF7Q7Z4P5 450 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 ST6GALNAC3Q8NDV1 305 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 CANT1Q8WVQ1 401 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 WDYHV1Q96HA8 205 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 PRRC1Q96M27 445 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 ZNF300Q96RE9 604 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 MAGIXQ9H6Y5 334 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 RHCGQ9UBD6 479 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 PRDM4Q9UKN5 801 aa18.04■□□□□ 0.48
SHKBP1-222ENST00000600320 KALRNO60229 2985 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 DHRS12A0PJE2 317 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 TRAPPC13A5PLN9 417 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 LINC01387J3KSC0 135 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 ZNF708P17019 499 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 PTGS2P35354 604 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 SUCLG1P53597 346 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 TAS2R41P59536 307 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 RAC1P63000 192 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 IGFBP7Q16270 282 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 ULK3Q6PHR2 472 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 GGNQ86UU5 652 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 ZDHHC21Q8IVQ6 265 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 DNAJA4Q8WW22 397 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 SARAFQ96BY9 339 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 SLC41A3Q96GZ6 507 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 RAB3IPQ96QF0 476 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 PRSS27Q9BQR3 290 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 IL1RAPQ9NPH3 570 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 CHRNA9Q9UGM1 479 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 RIMS3Q9UJD0 308 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 AURKCQ9UQB9 309 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 AP4B1Q9Y6B7 739 aa18.03■□□□□ 0.48
SHKBP1-222ENST00000600320 A0A0J9YW62 118 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 ZC3H12DA2A288 527 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 OR14I1A6ND48 311 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 SEC14L5O43304 696 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 OR5F1O95221 314 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 FABP3P05413 133 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 PTNP21246 168 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 SFTPDP35247 375 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms