RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 AQP8O94778 261 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 GP1BBP13224 206 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 IGFBP2P18065 325 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 AQP1P29972 269 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 PRDX6P30041 224 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 LARS2Q15031 903 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■■■■■ 60
SHKBP1-221ENST00000599833 CYP51A1Q16850 503 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 VMACQ2NL98 169 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 HACD2Q6Y1H2 254 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 CCDC80Q76M96 950 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 GRINAQ7Z429 371 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 SLC15A3Q8IY34 581 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 OR10Q1Q8NGQ4 319 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 SLC35B4Q969S0 331 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 PIF1Q9H611 641 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 RNF122Q9H9V4 155 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 NPDC1Q9NQX5 325 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 COQ3Q9NZJ6 369 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 OSGIN1Q9UJX0 560 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 ADAM21Q9UKJ8 722 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 CSMD1Q96PZ7 3565 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 NKX2-6A6NCS4 301 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 HSPB2A8KAH6 182 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 AIM2O14862 343 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 CXCL13O43927 109 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 TPST2O60704 377 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 FAM107AO95990 144 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 CD247P20963 164 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 HTR1EP28566 365 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 SFTPDP35247 375 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 EEFSECP57772 596 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 MERTKQ12866 999 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 PON3Q15166 354 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 HSPB2Q16082 182 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 ZSWIM7Q19AV6 140 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF440Q8IYI8 595 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 TMEM234Q8WY98 164 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 TAMM41Q96BW9 452 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 GID8Q9NWU2 228 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 JKAMPQ9P055 326 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF629Q9UEG4 869 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 APCP25054 2843 aa17.48■□□□□ 0.39
SHKBP1-221ENST00000599833 CSMD2Q7Z408 3487 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 SLC22A20A6NK97 555 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 CCT8L1PA6NM43 557 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 FAM90A27PA6NNH2 459 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 CYSRT1A8MQ03 144 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 NME4O00746 187 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 KLK2P20151 261 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 CTSSP25774 331 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 HTR2AP28223 471 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 APOBEC1P41238 236 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 SLC1A3P43003 542 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 EIF1AXP47813 144 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 HOXC5Q00444 222 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 DUSP7Q16829 419 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 TMEM176BQ3YBM2 270 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 C3orf33Q6P1S2 294 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 OR4D11Q8NGI4 311 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 CA5BP1Q8WTZ4 195 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 REXO5Q96IC2 774 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 TM9SF2Q99805 663 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 SH3GL1Q99961 368 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF232Q9UNY5 417 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 ANGPT4Q9Y264 503 aa17.47■□□□□ 0.39
SHKBP1-221ENST00000599833 A0A1W2PNR3 127 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 FAM220BPB1ANY3 271 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 PRSS44E7EML9 344 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 M0QX08 132 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 IL18BPO95998 194 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 IL2RAP01589 272 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 OPN1SWP03999 348 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 TMIGD3P0DMS9 266 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 KIR2DL2P43627 348 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 AGFG1P52594 562 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF239Q16600 458 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 HBMQ6B0K9 141 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF550Q7Z398 422 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 GCNT2Q8N0V5 402 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 FITM2Q8N6M3 262 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF563Q8TA94 476 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 C3orf49Q96BT1 292 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ARL5BQ96KC2 179 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ZFP3Q96NJ6 502 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ARL8BQ9NVJ2 186 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ABCD2Q9UBJ2 740 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 CHRNA9Q9UGM1 479 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 ING1Q9UK53 422 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 PRDM4Q9UKN5 801 aa17.46■□□□□ 0.39
SHKBP1-221ENST00000599833 HRNRQ86YZ3 2850 aaPredicted RBP17.46■□□□□ 0.38
SHKBP1-221ENST00000599833 TMED7-TICAM2A0A0A6YYA0 188 aa17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 A0A1W2PNV4 684 aa17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 TMEM72A0PK05 275 aa17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 LGI1O95970 557 aa17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 ME2P23368 584 aa17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 TACR3P29371 465 aa17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 KCNJ5P48544 419 aa17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 RPS3AP61247 264 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-221ENST00000599833 VEZF1Q14119 521 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms