RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 SUSD5O60279 629 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 SLC19A2O60779 497 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 ITGA2P17301 1181 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 SRD5A2P31213 254 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 PTGS2P35354 604 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 EPS8Q12929 822 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 RIPK1Q13546 671 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 C3AR1Q16581 482 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 EMC4Q5J8M3 183 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 ARHGAP11AQ6P4F7 1023 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 C3P1Q6ZMU1 363 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 DEF8Q6ZN54 512 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 LSRQ86X29 649 aaPredicted RBP13.57□□□□□ -0.24
TRIM28-207ENST00000597136 TMCO5AQ8N6Q1 288 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 OR5M9Q8NGP3 310 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 OR14L1PQ8NHC6 308 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 NEIL3Q8TAT5 605 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 PHF10Q8WUB8 498 aaKnown RBP13.57□□□□□ -0.24
TRIM28-207ENST00000597136 ZNF300Q96RE9 604 aaPredicted RBP13.57□□□□□ -0.24
TRIM28-207ENST00000597136 PRR14Q9BWN1 585 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 OR2B2Q9GZK3 357 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 HHATLQ9HCP6 504 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 TAS2R10Q9NYW0 307 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 TINAGQ9UJW2 476 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 ICAM5Q9UMF0 924 aa13.57□□□□□ -0.24
TRIM28-207ENST00000597136 PTPN13Q12923 2485 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 H0Y3Z8 333 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 J3KTA2 159 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 AP3D1O14617 1153 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 FMO6PO60774 539 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 DIRAS1O95057 198 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 LINGO3P0C6S8 592 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 ABOP16442 354 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 RHCEP18577 417 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 HTR2AP28223 471 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 MSX1P28360 303 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 RYKP34925 604 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
TRIM28-207ENST00000597136 P2RX1P51575 399 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 DSCR4P56555 118 aaPredicted RBP13.56□□□□□ -0.24
TRIM28-207ENST00000597136 B3GALT5-AS1P59052 145 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 RCN1Q15293 331 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 DCST1Q5T197 706 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 C1QL3Q5VWW1 255 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 RANBP3LQ86VV4 465 aaPredicted RBP13.56□□□□□ -0.24
TRIM28-207ENST00000597136 TSPYL5Q86VY4 417 aaPredicted RBP13.56□□□□□ -0.24
TRIM28-207ENST00000597136 DOLPP1Q86YN1 238 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 LILRA2Q8N149 483 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 TOR1AIP2Q8NFQ8 470 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 OR5W2Q8NH69 310 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 B4GALNT2Q8NHY0 566 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 C1GALT1C1Q96EU7 318 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 MCHR1Q99705 422 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 ZNF559Q9BR84 538 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 DCLRE1BQ9H816 532 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 TESQ9UGI8 421 aaKnown RBP13.56□□□□□ -0.24
TRIM28-207ENST00000597136 VDAC3Q9Y277 283 aa13.56□□□□□ -0.24
TRIM28-207ENST00000597136 FAM32AQ9Y421 112 aaKnown RBP13.56□□□□□ -0.24
TRIM28-207ENST00000597136 DOPEY1Q5JWR5 2465 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 HCFC1P51610 2035 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 AQP7O14520 342 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 FFAR1O14842 300 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 HCN1O60741 890 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 TPOP07202 933 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 STSP08842 583 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 FCGR1AP12314 374 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 BMP7P18075 431 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 HK1P19367 917 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 SLC6A8P48029 635 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 STARP49675 285 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 CCR4P51679 360 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 TOMM34Q15785 309 aaPredicted RBP13.55□□□□□ -0.24
TRIM28-207ENST00000597136 GXYLT1Q4G148 440 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 Q6ZPB1 254 aaPredicted RBP13.55□□□□□ -0.24
TRIM28-207ENST00000597136 GPR119Q8TDV5 335 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 LRTOMTQ8WZ04 291 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 ZNF347Q96SE7 839 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 PIP5K1AQ99755 562 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 PNPLA3Q9NST1 481 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 DKKL1Q9UK85 242 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 A4GNTQ9UNA3 340 aa13.55□□□□□ -0.24
TRIM28-207ENST00000597136 MRPS18CQ9Y3D5 142 aaKnown RBP13.55□□□□□ -0.24
TRIM28-207ENST00000597136 TRGV8A0A0C4DH27 118 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 FAAHO00519 579 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 CLOCKO15516 846 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 PRSS23O95084 383 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 CST1P01037 141 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 FASP25445 335 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 SUMO3P55854 103 aaPredicted RBP13.54□□□□□ -0.24
TRIM28-207ENST00000597136 GFRA1P56159 465 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 RBPJQ06330 500 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 CRYZQ08257 329 aaKnown RBP13.54□□□□□ -0.24
TRIM28-207ENST00000597136 PIN1Q13526 163 aaPredicted RBP13.54□□□□□ -0.24
TRIM28-207ENST00000597136 CBFBQ13951 182 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 ATP6AP1Q15904 470 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 ENTPD8Q5MY95 495 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 VASNQ6EMK4 673 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 OR2T5Q6IEZ7 315 aa13.54□□□□□ -0.24
TRIM28-207ENST00000597136 NCCRP1Q6ZVX7 275 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms