RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PHOSPHO1Q8TCT1 267 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 SLC41A3Q96GZ6 507 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 RTN4RQ9BZR6 473 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 EVA1AQ9H8M9 152 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 ASCL3Q9NQ33 180 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 CDV3Q9UKY7 258 aaKnown RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.1□□□□□ -0.47
VRK3-205ENST00000593919 MGAT4BQ9UQ53 548 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 SH3PXD2BA1X283 911 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 PPM1BO75688 479 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 OR5F1O95221 314 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 NTN1O95631 604 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 NGFRP08138 427 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 UBL4AP11441 157 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 CD82P27701 267 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 EVI2BP34910 448 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 FBXW4P57775 412 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
VRK3-205ENST00000593919 TRAM2Q15035 370 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 MOGQ16653 247 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 ANKDD1AQ495B1 522 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 UBE2UQ5VVX9 321 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 PTCHD4Q6ZW05 846 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 LSRQ86X29 649 aaPredicted RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 IL22RA1Q8N6P7 574 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 POGLUT1Q8NBL1 392 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 OR5M3Q8NGP4 307 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 NKD1Q969G9 470 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 SLC35B4Q969S0 331 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 POLR2J2Q9GZM3 115 aaKnown RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 POLR2J3Q9H1A7 115 aaKnown RBP12.1□□□□□ -0.47
VRK3-205ENST00000593919 FKBP14Q9NWM8 211 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 REV1Q9UBZ9 1251 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 FBXL4Q9UKA2 621 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 SLC7A7Q9UM01 511 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 LOC400499M0QZD8 3231 aa12.1□□□□□ -0.47
VRK3-205ENST00000593919 TRAPPC13A5PLN9 417 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 ALG1L2C9J202 215 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 H3BN98 237 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 SLC22A1O15245 554 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 GFRA3O60609 400 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 INHBBP09529 407 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 OSMP13725 252 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 CD36P16671 472 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 TGFBR2P37173 567 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 SKP2Q13309 424 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 PGBD2Q6P3X8 592 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 ZNF550Q7Z398 422 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 MRGPREQ86SM8 312 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 CROCCP3Q8IVE0 287 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 NKAIN4Q8IVV8 208 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 RPL3LQ92901 407 aaKnown RBP12.09□□□□□ -0.47
VRK3-205ENST00000593919 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 NACC2Q96BF6 587 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 BCL7BQ9BQE9 202 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 ZNF559Q9BR84 538 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 ANKRD19PQ9H560 264 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 CLN6Q9NWW5 311 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 P4HTMQ9NXG6 502 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 IL17BQ9UHF5 180 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 A0A087WUU8 490 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 A0A1W2PQD3 144 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 M0R3G1 203 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 ZNF264O43296 627 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 OIP5O43482 229 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 BMXP51813 675 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 NCS1P62166 190 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 TEKQ02763 1124 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 ST3GAL4Q11206 333 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 TBCEQ15813 527 aaPredicted RBP12.09□□□□□ -0.47
VRK3-205ENST00000593919 CBLN3Q6UW01 205 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 LYPD8Q6UX82 237 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 MARCH3Q86UD3 253 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 DTX1Q86Y01 620 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 OR4K5Q8NGD3 323 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 SLC22A8Q8TCC7 542 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 FCGR1BQ92637 280 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 SLC38A4Q969I6 547 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 IL4I1Q96RQ9 567 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 RASL10BQ96S79 203 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 TBL1XR1Q9BZK7 514 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 CARD8Q9Y2G2 431 aa12.09□□□□□ -0.47
VRK3-205ENST00000593919 A0A0B4J2E0 115 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 A0A1B0GX12 115 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 C17orf51A8MQB3 221 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 J3QRK9 145 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 GTPBP1O00178 669 aaKnown RBP12.08□□□□□ -0.48
VRK3-205ENST00000593919 NDUFB5O43674 189 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 SCO2O43819 266 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 FADS1O60427 444 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 ITGA10O75578 1167 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 HPP00738 406 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 PTNP21246 168 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TGFBR1P36897 503 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 LIPAP38571 399 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TMED10P49755 219 aaKnown RBP12.08□□□□□ -0.48
VRK3-205ENST00000593919 Q0VFX4 171 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TMED1Q13445 227 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 EFR3AQ14156 821 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms